Protein Domain : IPR003731

Type:  Domain Name:  Dinitrogenase iron-molybdenum cofactor biosynthesis
Description:  This entry represents several Nif (B, X and Y) proteins, which are involved in the biosynthesis of the iron-molybdenum cofactor (FeMo-co) found in the dinitrogenase enzyme of the nitrogenase complex in nitrogen-fixing bacteria. The nitrogenase complex catalyses the reduction of atmospheric dinitrogen to ammonia, and is composed of an iron metalloprotein (dinitrogenase reductase; homodimer of NifH; ) and a Fe-Mo metalloprotein (dinitrogenase; heterotetramer of NifD and NifK; ). The pathway for the synthesis of the Fe-Mo cofactor involves several proteins, including NifB, NifE, NifH, NifN, NifQ, NifV and NifX. NifB appears to be an iron-sulphur source for FeMo-co biosynthesis, while NifX may be associated with the mature FeMo-co, in particular with the addition of homocitrate during the last step of biosynthesis []. The NifX protein shows sequence similarity with the C terminus of NifB [], as well as to the conserved protein MTH1175 from the archaeon Methanobacterium thermoautotrophicum, which displays a ribonuclease H-like motif of three layers, alpha/beta/alpha, with a single mixed beta-sheet []. Short Name:  Di-Nase_FeMo-co_biosynth

0 Child Features

0 Contains

3 Cross Referencess

Identifier
PF02579
G3DSA:3.30.420.130
SSF53146

2 Found Ins

DB identifier Type Name
IPR005980 Family Nitrogenase cofactor biosynthesis protein NifB
IPR013480 Family Nitrogen fixation protein NifX

0 GO Annotation

0 Ontology Annotations

0 Parent Features

163 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
29004.m000054 B9T942 PAC:16802140 Ricinus communis 144  
Cucsa.236680.1 PAC:16970504 Cucumis sativus 208  
orange1.1g029003m A0A067GCX8 PAC:18138921 Citrus sinensis 200  
Lus10006068 PAC:23147728 Linum usitatissimum 840  
9112 A4S4A0 PAC:27420594 Ostreococcus lucimarinus 121  
Thecc1EG027247t1 A0A061GFQ5 PAC:27439412 Theobroma cacao 271  
Migut.B01779.1.p PAC:28946506 Mimulus guttatus 1126  
Glyma.19G206300.4.p K7MZG0 PAC:30513961 Glycine max 260  
Glyma.19G206300.1.p K7MZF8 PAC:30513959 Glycine max 300  
Glyma.19G206300.2.p K7MZF8 PAC:30513958 Glycine max 300  
Glyma.19G206300.3.p K7MZG0 PAC:30513960 Glycine max 260  
Brara.B02339.1.p A0A398AJ81 PAC:30609713 Brassica rapa FPsc 444  
Medtr3g071470.1 G7JBX1 PAC:31057195 Medicago truncatula 168  
Medtr4g099310.1 A0A072URC2 PAC:31112304 Medicago truncatula 178  
Spipo18G0033200 PAC:31518593 Spirodela polyrhiza 166  
evm_27.model.AmTr_v1.0_scaffold00005.166 W1PAG8 PAC:31575907 Amborella trichopoda 64  
Traes_3AS_4FC310C78.3 PAC:31958690 Triticum aestivum 303  
Traes_3AS_4FC310C78.2 PAC:31958688 Triticum aestivum 304  
Traes_3AS_4FC310C78.1 PAC:31958689 Triticum aestivum 303  
Traes_3B_74D1769AF.12 PAC:31788876 Triticum aestivum 273  
Traes_3B_74D1769AF.11 PAC:31788875 Triticum aestivum 303  
Traes_3B_74D1769AF.10 PAC:31788874 Triticum aestivum 304  
Traes_3DS_6B271B570.3 PAC:31760980 Triticum aestivum 377  
Traes_3DS_6B271B570.2 PAC:31760981 Triticum aestivum 377  
Traes_3DS_6B271B570.1 PAC:31760979 Triticum aestivum 378  
Traes_3DS_6B271B570.5 PAC:31760983 Triticum aestivum 303  
Traes_4BL_A33060036.1 PAC:31927421 Triticum aestivum 78  
Traes_6BL_B703F7F75.3 PAC:31843113 Triticum aestivum 96  
Prupe.5G112200.1.p A0A251PAB8 PAC:32098683 Prunus persica 307  
Prupe.1G447300.1.p M5Y804 PAC:32111125 Prunus persica 384  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            12836677
            11279153
            12892890