Protein Domain : IPR020449

Type:  Family Name:  Transcription regulator HTH, AraC- type
Description:  Numerous bacterial transcription regulatory proteins bind DNA via a helix-turn-helix (HTH) motif. These proteins are very diverse, but for convenience may be grouped into subfamilies on the basis of sequence similarity. One such family groups together a range of proteins, including aadA, appY, aracC, celD, envY, exsA, fapR, melR, mmsR, rhaR, rhaS, rns, soxS, tetD, virF and xylS [, , ]. Although the sequences belonging to this family differ somewhat in length, in each case the HTH motif is situated towards the C terminus. Short Name:  Tscrpt_reg_HTH_AraC-type
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1 Child Features

DB identifier Type Name
IPR023699 Family Transcription activator HTH, RhaR

1 Contains

DB identifier Type Name
IPR018062 Conserved_site HTH domain AraC-type, conserved site

1 Cross References

Identifier
PR00032

0 Found In

2 GO Annotations

GO Term Gene Name
GO:0003700 IPR020449
GO:0006355 IPR020449

2 Ontology Annotations

GO Term Gene Name
GO:0003700 IPR020449
GO:0006355 IPR020449

0 Parent Features

17 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
30588.m000014 B9TM32 PAC:16824492 Ricinus communis 267  
30753.m000027 B9TG15 PAC:16824595 Ricinus communis 294  
33511.m000018 B9TJG8 PAC:16825876 Ricinus communis 331  
34357.m000025 B9TN09 PAC:16826189 Ricinus communis 221  
34357.m000026 B9TN10 PAC:16826190 Ricinus communis 56  
35125.m000018 B9TFC4 PAC:16826496 Ricinus communis 262  
39448.m000024 B9TE15 PAC:16827199 Ricinus communis 328  
50884.m000015 B9TPM6 PAC:16828325 Ricinus communis 282  
51228.m000021 B9TJC5 PAC:16828370 Ricinus communis 239  
53897.m000035 B9TL19 PAC:16828657 Ricinus communis 57  
28532.m000033 B9TC48 PAC:16801049 Ricinus communis 399  
Pp3s58_170V3.1.p PAC:32929808 Physcomitrium patens 855  
Pp3s58_100V3.1.p PAC:32929817 Physcomitrium patens 328  
VigunL051800.1.p PAC:43084455 Vigna unguiculata 521  
SpUn1360_0010.1 PAC:45083546 Schrenkiella parvula 228  
Zosma07g00430 PAC:50102022 Zostera marina 247  
Zosma07g01410 PAC:50101706 Zostera marina 280  

3 Publications

First Author Title Year Journal Volume Pages PubMed ID
            1339433
            1708380
            1655713