Gene : Cre06.g278186 C. reinhardtii

Defline:  (1 of 5) PF13676 - TIR domain (TIR_2) Name:  ? Cre06.g278186
Secondary Identifier:  ? PAC:30779239

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

4 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cre06.g278186 5.0kb upstream 5.0kb upstream 12504   true chromosome_6: 3925268-3937771 Chlamydomonas reinhardtii
Cre06.g278186 5.0kb upstream 5.0kb upstream 5000   false chromosome_6: 3932772-3937771 Chlamydomonas reinhardtii
Cre06.g278186 5.0kb downstream 5.0kb downstream 12504   true chromosome_6: 3920268-3932771 Chlamydomonas reinhardtii
Cre06.g278186 5.0kb downstream 5.0kb downstream 5000   false chromosome_6: 3920268-3925267 Chlamydomonas reinhardtii

2 Homologs


Gene . Primary Identifier

Ortholog _ Organism . Short Name

Ortholog _ Gene . Primary Identifier
Cre06.g278186 D. salina Dusal.0370s00001
Cre06.g278186 D. salina Dusal.0480s00005

133 Rna Seq Expressionss

Countvariance Method Conflo Count Status Countdispersionvar Library Expression Level Abundance Confhi Locus Expression Level Countuncertaintyvar
238.354 cufflinks 0.781361 39.0702 OK 238.354   3.72619 6.67101   0.0
6548.51 cufflinks 0.57057 195.198 OK 6548.51   3.3393 6.10803 Low 0.0
21911.8 cufflinks 0.0 290.672 OK 21911.8   14.6434 29.5578   0.0
101006.0 cufflinks 2.24331 765.937 OK 101006.0   13.1858 24.1282 High 0.0
1435.83 cufflinks 0.0 70.9835 OK 1435.83   3.60142 7.44644   0.0
5439.71 cufflinks 0.387187 174.736 OK 5439.71   2.48488 4.58256 High 0.0
12906.0 cufflinks 0.955249 282.642 OK 12906.0   4.87066 8.78607   0.0
3677.59 cufflinks 0.977656 151.432 OK 3677.59   4.91113 8.8446 Low 0.0
6025.24 cufflinks 1.26131 194.168 OK 6025.24   6.29207 11.3228 Low 0.0
9997.04 cufflinks 0.0 197.989 OK 9997.04   9.83084 19.76   0.0
33847.6 cufflinks 1.59211 458.583 OK 33847.6   8.05613 14.5201   0.0
5536.12 cufflinks 0.393601 176.435 OK 5536.12   2.51385 4.63411 High 0.0
34778.9 cufflinks 5.69007 848.319 OK 34778.9   10.1549 14.6197   0.0
588.375 cufflinks 1.76358 65.8981 OK 588.375   6.6848 11.606   0.0
338.515 cufflinks 1.19337 48.3751 OK 338.515   4.98634 8.7793   0.0
43383.3 cufflinks 0.0 403.615 OK 43383.3   20.1295 40.9053 High 0.0
609.323 cufflinks 1.83968 67.1446 OK 609.323   6.94908 12.0585   0.0
7715.59 cufflinks 0.0 174.023 OK 7715.59   8.62757 17.3371   0.0
1007.81 cufflinks 2.29715 87.2568 OK 1007.81   8.43443 14.5717 High 0.0
3904.98 cufflinks 0.28859 145.053 OK 3904.98   2.08542 3.88225   0.0
147197.0 cufflinks 2.45493 910.718 OK 147197.0   15.5917 28.7285 High 0.0
780.434 cufflinks 1.93734 76.503 OK 780.434   7.18413 12.4309   0.0
1118.19 cufflinks 2.53664 91.9763 OK 1118.19   9.29613 16.0556 High 0.0
4262.38 cufflinks 1.0435 163.277 OK 4262.38   5.20982 9.37615 Low 0.0
1268.48 cufflinks 0.0 66.0091 OK 1268.48   3.33963 6.94347   0.0
74313.9 cufflinks 2.16645 664.548 OK 74313.9   12.0643 21.9622 High 0.0
17349.6 cufflinks 1.13136 329.353 OK 17349.6   5.65278 10.1742   0.0
236.395 cufflinks 0.782188 38.8677 OK 236.395   3.74527 6.70835   0.0
1475.81 cufflinks 0.0 72.1257 OK 1475.81   3.73624 7.71631   0.0
137.134 cufflinks 0.361946 27.1889 OK 137.134   2.61167 4.8614   0.0