Gene : Glyma.U040200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13234:SF8 - GAMMA-INTERFERON-INDUCIBLE LYSOSOMAL THIOL REDUCTASE Genomic Order:  1
Name:  ? Glyma.U040200 Secondary Identifier:  ? PAC:30482576
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U040200 0.5kb upstream 0.5kb upstream 2403 true scaffold_587: 1014-3416 Glycine max
Glyma.U040200 0.5kb upstream 0.5kb upstream 500 false scaffold_587: 1014-1513 Glycine max
Glyma.U040200 0.5kb downstream 0.5kb downstream 2403 true scaffold_587: 1514-3916 Glycine max
Glyma.U040200 0.5kb downstream 0.5kb downstream 500 false scaffold_587: 3417-3916 Glycine max
Glyma.U040200 1.0kb upstream 1.0kb upstream 2903 true scaffold_587: 514-3416 Glycine max
Glyma.U040200 1.0kb upstream 1.0kb upstream 1000 false scaffold_587: 514-1513 Glycine max
Glyma.U040200 1.0kb downstream 1.0kb downstream 2903 true scaffold_587: 1514-4416 Glycine max
Glyma.U040200 1.0kb downstream 1.0kb downstream 1000 false scaffold_587: 3417-4416 Glycine max
Glyma.U040200 2.0kb upstream 2.0kb upstream 3416 true scaffold_587: 1-3416 Glycine max
Glyma.U040200 2.0kb upstream 2.0kb upstream 1513 false scaffold_587: 1-1513 Glycine max
Glyma.U040200 2.0kb downstream 2.0kb downstream 3903 true scaffold_587: 1514-5416 Glycine max
Glyma.U040200 2.0kb downstream 2.0kb downstream 2000 false scaffold_587: 3417-5416 Glycine max
Glyma.U040200 5.0kb upstream 5.0kb upstream 3416 true scaffold_587: 1-3416 Glycine max
Glyma.U040200 5.0kb upstream 5.0kb upstream 1513 false scaffold_587: 1-1513 Glycine max
Glyma.U040200 5.0kb downstream 5.0kb downstream 6903 true scaffold_587: 1514-8416 Glycine max
Glyma.U040200 5.0kb downstream 5.0kb downstream 5000 false scaffold_587: 3417-8416 Glycine max
Glyma.U040200 10.0kb upstream 10.0kb upstream 3416 true scaffold_587: 1-3416 Glycine max
Glyma.U040200 10.0kb upstream 10.0kb upstream 1513 false scaffold_587: 1-1513 Glycine max
Glyma.U040200 10.0kb downstream 10.0kb downstream 6955 true scaffold_587: 1514-8468 Glycine max
Glyma.U040200 10.0kb downstream 10.0kb downstream 5052 false scaffold_587: 3417-8468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029876 5273 Angiosperm View MSA
122316521 5265 Fabidae View MSA
124037101 5270 Rosid View MSA
123610197 5271 Pentapetalae View MSA
122644828 5272 Eudicot View MSA
121350109 5274 Embryophyte View MSA
123381582 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.292535 0.0 1.16509    
cufflinks 3.69837 0.0 12.9763   High
cufflinks 0.0696558 0.0 0.300136 Low Low
cufflinks 0.0955352 0.0 0.401965 Low Low
cufflinks 1.36653 0.0 5.10562    
cufflinks 1.19737 0.0 4.5006    
cufflinks 1.90864 0.0 7.01186    
cufflinks 0.557163 0.0 2.16387    
cufflinks 0.293741 0.0 1.16866    
cufflinks 0.172        
cufflinks 0.01     Low Low
cufflinks 0.06     Low  
cufflinks 0.077     Low  
cufflinks 0.361        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.263        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.131        
cufflinks 0.428        
cufflinks 0.416        
cufflinks 0.009     Low Low
cufflinks 0.455        
cufflinks 0.47        
cufflinks 0.011     Low Low
cufflinks 0.367        
cufflinks 0.028     Low  

0 Strain