Gene : Glyma.U039200 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11850:SF64 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 1 Genomic Order:  16
Name:  ? Glyma.U039200 Secondary Identifier:  ? PAC:30541486
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U039200 0.5kb upstream 0.5kb upstream 6915 true scaffold_44: 165478-172392 Glycine max
Glyma.U039200 0.5kb upstream 0.5kb upstream 500 false scaffold_44: 171893-172392 Glycine max
Glyma.U039200 0.5kb downstream 0.5kb downstream 6915 true scaffold_44: 164978-171892 Glycine max
Glyma.U039200 0.5kb downstream 0.5kb downstream 500 false scaffold_44: 164978-165477 Glycine max
Glyma.U039200 1.0kb upstream 1.0kb upstream 7415 true scaffold_44: 165478-172892 Glycine max
Glyma.U039200 1.0kb upstream 1.0kb upstream 1000 false scaffold_44: 171893-172892 Glycine max
Glyma.U039200 1.0kb downstream 1.0kb downstream 7415 true scaffold_44: 164478-171892 Glycine max
Glyma.U039200 1.0kb downstream 1.0kb downstream 1000 false scaffold_44: 164478-165477 Glycine max
Glyma.U039200 2.0kb upstream 2.0kb upstream 8415 true scaffold_44: 165478-173892 Glycine max
Glyma.U039200 2.0kb upstream 2.0kb upstream 2000 false scaffold_44: 171893-173892 Glycine max
Glyma.U039200 2.0kb downstream 2.0kb downstream 8415 true scaffold_44: 163478-171892 Glycine max
Glyma.U039200 2.0kb downstream 2.0kb downstream 2000 false scaffold_44: 163478-165477 Glycine max
Glyma.U039200 5.0kb upstream 5.0kb upstream 11415 true scaffold_44: 165478-176892 Glycine max
Glyma.U039200 5.0kb upstream 5.0kb upstream 5000 false scaffold_44: 171893-176892 Glycine max
Glyma.U039200 5.0kb downstream 5.0kb downstream 11415 true scaffold_44: 160478-171892 Glycine max
Glyma.U039200 5.0kb downstream 5.0kb downstream 5000 false scaffold_44: 160478-165477 Glycine max
Glyma.U039200 10.0kb upstream 10.0kb upstream 12254 true scaffold_44: 165478-177731 Glycine max
Glyma.U039200 10.0kb upstream 10.0kb upstream 5839 false scaffold_44: 171893-177731 Glycine max
Glyma.U039200 10.0kb downstream 10.0kb downstream 16415 true scaffold_44: 155478-171892 Glycine max
Glyma.U039200 10.0kb downstream 10.0kb downstream 10000 false scaffold_44: 155478-165477 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301838 5265 Fabidae View MSA
124072037 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 12.8213 0.0 44.2631    
cufflinks 0.69783 0.0 4.09794    
cufflinks 0.254205 0.0 1.23666   Low
cufflinks 4.92699 0.0 17.249    
cufflinks 0.679219 0.0 3.04669    
cufflinks 1.67744 0.0 8.38964    
cufflinks 86.8651 0.0 367.687 High High
cufflinks 4.73748 0.0 16.6589    
cufflinks 4.774       High
cufflinks 0.107        
cufflinks 0.136        
cufflinks 0.147        
cufflinks 0.152        
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.365       High
cufflinks 0.109     Low  
cufflinks 1.437       High
cufflinks 0.001     Low Low
cufflinks 0.214        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.131        
cufflinks 0.002     Low Low
cufflinks 0.269        

0 Strain