Gene : Glyma.U036900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10378:SF9 - CHIP, ISOFORM B Genomic Order:  1
Name:  ? Glyma.U036900 Secondary Identifier:  ? PAC:30535471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U036900 0.5kb upstream 0.5kb upstream 4615 true scaffold_376: 1899-6513 Glycine max
Glyma.U036900 0.5kb upstream 0.5kb upstream 500 false scaffold_376: 6014-6513 Glycine max
Glyma.U036900 0.5kb downstream 0.5kb downstream 4615 true scaffold_376: 1399-6013 Glycine max
Glyma.U036900 0.5kb downstream 0.5kb downstream 500 false scaffold_376: 1399-1898 Glycine max
Glyma.U036900 1.0kb upstream 1.0kb upstream 5115 true scaffold_376: 1899-7013 Glycine max
Glyma.U036900 1.0kb upstream 1.0kb upstream 1000 false scaffold_376: 6014-7013 Glycine max
Glyma.U036900 1.0kb downstream 1.0kb downstream 5115 true scaffold_376: 899-6013 Glycine max
Glyma.U036900 1.0kb downstream 1.0kb downstream 1000 false scaffold_376: 899-1898 Glycine max
Glyma.U036900 2.0kb upstream 2.0kb upstream 6115 true scaffold_376: 1899-8013 Glycine max
Glyma.U036900 2.0kb upstream 2.0kb upstream 2000 false scaffold_376: 6014-8013 Glycine max
Glyma.U036900 2.0kb downstream 2.0kb downstream 6013 true scaffold_376: 1-6013 Glycine max
Glyma.U036900 2.0kb downstream 2.0kb downstream 1898 false scaffold_376: 1-1898 Glycine max
Glyma.U036900 5.0kb upstream 5.0kb upstream 9115 true scaffold_376: 1899-11013 Glycine max
Glyma.U036900 5.0kb upstream 5.0kb upstream 5000 false scaffold_376: 6014-11013 Glycine max
Glyma.U036900 5.0kb downstream 5.0kb downstream 6013 true scaffold_376: 1-6013 Glycine max
Glyma.U036900 5.0kb downstream 5.0kb downstream 1898 false scaffold_376: 1-1898 Glycine max
Glyma.U036900 10.0kb upstream 10.0kb upstream 10543 true scaffold_376: 1899-12441 Glycine max
Glyma.U036900 10.0kb upstream 10.0kb upstream 6428 false scaffold_376: 6014-12441 Glycine max
Glyma.U036900 10.0kb downstream 10.0kb downstream 6013 true scaffold_376: 1-6013 Glycine max
Glyma.U036900 10.0kb downstream 10.0kb downstream 1898 false scaffold_376: 1-1898 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240569 5265 Fabidae Singleton cluster - no MSA
123985601 5270 Rosid Singleton cluster - no MSA
123753463 5271 Pentapetalae View MSA
122793481 5272 Eudicot View MSA
122042043 5273 Angiosperm View MSA
121349774 5274 Embryophyte View MSA
123381439 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.83682E-5 0.0 0.00134285 Low  
cufflinks 7.13439E-6 0.0 6.70001E-4 Low Low
cufflinks 0.0141853 0.0 0.0651696 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0146197 0.0 0.0669614 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.118        
cufflinks 0.14        
cufflinks 0.18        
cufflinks 0.103       Low
cufflinks 0.092       Low
cufflinks 0.093       Low
cufflinks 0.179        
cufflinks 0.13        
cufflinks 0.152        
cufflinks 0.14        
cufflinks 0.131        
cufflinks 0.197       High
cufflinks 0.231       High
cufflinks 0.116        
cufflinks 0.156        
cufflinks 0.161        
cufflinks 0.242       High

0 Strain