Gene : Glyma.U044100 G. max Wm82.a2.v1
Defline:  (1 of 24) PTHR12203 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED Genomic Order:  1
Name:  ? Glyma.U044100 Secondary Identifier:  ? PAC:30535247
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U044100 0.5kb upstream 0.5kb upstream 2147 true scaffold_93: 4537-6683 Glycine max
Glyma.U044100 0.5kb upstream 0.5kb upstream 500 false scaffold_93: 4537-5036 Glycine max
Glyma.U044100 0.5kb downstream 0.5kb downstream 2147 true scaffold_93: 5037-7183 Glycine max
Glyma.U044100 0.5kb downstream 0.5kb downstream 500 false scaffold_93: 6684-7183 Glycine max
Glyma.U044100 1.0kb upstream 1.0kb upstream 2647 true scaffold_93: 4037-6683 Glycine max
Glyma.U044100 1.0kb upstream 1.0kb upstream 1000 false scaffold_93: 4037-5036 Glycine max
Glyma.U044100 1.0kb downstream 1.0kb downstream 2647 true scaffold_93: 5037-7683 Glycine max
Glyma.U044100 1.0kb downstream 1.0kb downstream 1000 false scaffold_93: 6684-7683 Glycine max
Glyma.U044100 2.0kb upstream 2.0kb upstream 3647 true scaffold_93: 3037-6683 Glycine max
Glyma.U044100 2.0kb upstream 2.0kb upstream 2000 false scaffold_93: 3037-5036 Glycine max
Glyma.U044100 2.0kb downstream 2.0kb downstream 3647 true scaffold_93: 5037-8683 Glycine max
Glyma.U044100 2.0kb downstream 2.0kb downstream 2000 false scaffold_93: 6684-8683 Glycine max
Glyma.U044100 5.0kb upstream 5.0kb upstream 6647 true scaffold_93: 37-6683 Glycine max
Glyma.U044100 5.0kb upstream 5.0kb upstream 5000 false scaffold_93: 37-5036 Glycine max
Glyma.U044100 5.0kb downstream 5.0kb downstream 6647 true scaffold_93: 5037-11683 Glycine max
Glyma.U044100 5.0kb downstream 5.0kb downstream 5000 false scaffold_93: 6684-11683 Glycine max
Glyma.U044100 10.0kb upstream 10.0kb upstream 6683 true scaffold_93: 1-6683 Glycine max
Glyma.U044100 10.0kb upstream 10.0kb upstream 5036 false scaffold_93: 1-5036 Glycine max
Glyma.U044100 10.0kb downstream 10.0kb downstream 11647 true scaffold_93: 5037-16683 Glycine max
Glyma.U044100 10.0kb downstream 10.0kb downstream 10000 false scaffold_93: 6684-16683 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313058 5265 Fabidae View MSA
124070389 5270 Rosid View MSA
123750097 5271 Pentapetalae View MSA
122773467 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.837296 0.0 4.17342    
cufflinks 0.114299 0.0 0.467537 Low  
cufflinks 1.08404 0.0 5.12484    
cufflinks 0.396676 0.0 1.99933    
cufflinks 0.023362 0.0 0.112846 Low Low
cufflinks 0.0508155 0.0 0.220559 Low  
cufflinks 6.19342 0.0 37.0754   High
cufflinks 0.0181061 0.0 0.0889285 Low Low
cufflinks 0.1495 0.0 0.619088 Low  
cufflinks 0.01     Low  
cufflinks 0.007     Low  
cufflinks 0.072     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.01     Low  
cufflinks 0.099     Low High
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain