Gene : Glyma.U019800 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31384:SF20 - AUXIN RESPONSE FACTOR 4 Genomic Order:  107
Name:  ? Glyma.U019800 Secondary Identifier:  ? PAC:30535343
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U019800 0.5kb upstream 0.5kb upstream 18471 true scaffold_21: 3284776-3303246 Glycine max
Glyma.U019800 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3284776-3285275 Glycine max
Glyma.U019800 0.5kb downstream 0.5kb downstream 18471 true scaffold_21: 3285276-3303746 Glycine max
Glyma.U019800 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3303247-3303746 Glycine max
Glyma.U019800 1.0kb upstream 1.0kb upstream 18971 true scaffold_21: 3284276-3303246 Glycine max
Glyma.U019800 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3284276-3285275 Glycine max
Glyma.U019800 1.0kb downstream 1.0kb downstream 18971 true scaffold_21: 3285276-3304246 Glycine max
Glyma.U019800 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3303247-3304246 Glycine max
Glyma.U019800 2.0kb upstream 2.0kb upstream 19971 true scaffold_21: 3283276-3303246 Glycine max
Glyma.U019800 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3283276-3285275 Glycine max
Glyma.U019800 2.0kb downstream 2.0kb downstream 19971 true scaffold_21: 3285276-3305246 Glycine max
Glyma.U019800 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3303247-3305246 Glycine max
Glyma.U019800 5.0kb upstream 5.0kb upstream 22971 true scaffold_21: 3280276-3303246 Glycine max
Glyma.U019800 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3280276-3285275 Glycine max
Glyma.U019800 5.0kb downstream 5.0kb downstream 22971 true scaffold_21: 3285276-3308246 Glycine max
Glyma.U019800 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3303247-3308246 Glycine max
Glyma.U019800 10.0kb upstream 10.0kb upstream 27971 true scaffold_21: 3275276-3303246 Glycine max
Glyma.U019800 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3275276-3285275 Glycine max
Glyma.U019800 10.0kb downstream 10.0kb downstream 27971 true scaffold_21: 3285276-3313246 Glycine max
Glyma.U019800 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3303247-3313246 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310336 5265 Fabidae View MSA
124066923 5270 Rosid View MSA
123747350 5271 Pentapetalae View MSA
122795169 5272 Eudicot View MSA
122043529 5273 Angiosperm View MSA
121310144 5274 Embryophyte View MSA
123347713 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.14283 0.0 12.8768    
cufflinks 9.5564 0.0 33.4147    
cufflinks 2.05169 0.0 7.87648   Low
cufflinks 8.63161 0.0 26.4882    
cufflinks 3.15459 0.0 10.8415    
cufflinks 1.85183 0.0 5.69872   Low
cufflinks 9.30141 0.0 28.081    
cufflinks 12.0441 0.0 36.5265   High
cufflinks 4.43557 0.0 14.0762    
cufflinks 1.682       High
cufflinks 0.034     Low Low
cufflinks 0.576        
cufflinks 0.37        
cufflinks 0.105       Low
cufflinks 0.077       Low
cufflinks 0.641        
cufflinks 0.491        
cufflinks 0.875        
cufflinks 1.591       High
cufflinks 0.598        
cufflinks 0.106       Low
cufflinks 0.673        
cufflinks 0.648        
cufflinks 0.065       Low
cufflinks 0.595        
cufflinks 0.229        

0 Strain