Gene : Glyma.U022000 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR12603:SF3 - RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN Genomic Order:  129
Name:  ? Glyma.U022000 Secondary Identifier:  ? PAC:30535260
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U022000 0.5kb upstream 0.5kb upstream 8228 true scaffold_21: 3534205-3542432 Glycine max
Glyma.U022000 0.5kb upstream 0.5kb upstream 500 false scaffold_21: 3534205-3534704 Glycine max
Glyma.U022000 0.5kb downstream 0.5kb downstream 8228 true scaffold_21: 3534705-3542932 Glycine max
Glyma.U022000 0.5kb downstream 0.5kb downstream 500 false scaffold_21: 3542433-3542932 Glycine max
Glyma.U022000 1.0kb upstream 1.0kb upstream 8728 true scaffold_21: 3533705-3542432 Glycine max
Glyma.U022000 1.0kb upstream 1.0kb upstream 1000 false scaffold_21: 3533705-3534704 Glycine max
Glyma.U022000 1.0kb downstream 1.0kb downstream 8728 true scaffold_21: 3534705-3543432 Glycine max
Glyma.U022000 1.0kb downstream 1.0kb downstream 1000 false scaffold_21: 3542433-3543432 Glycine max
Glyma.U022000 2.0kb upstream 2.0kb upstream 9728 true scaffold_21: 3532705-3542432 Glycine max
Glyma.U022000 2.0kb upstream 2.0kb upstream 2000 false scaffold_21: 3532705-3534704 Glycine max
Glyma.U022000 2.0kb downstream 2.0kb downstream 9728 true scaffold_21: 3534705-3544432 Glycine max
Glyma.U022000 2.0kb downstream 2.0kb downstream 2000 false scaffold_21: 3542433-3544432 Glycine max
Glyma.U022000 5.0kb upstream 5.0kb upstream 12728 true scaffold_21: 3529705-3542432 Glycine max
Glyma.U022000 5.0kb upstream 5.0kb upstream 5000 false scaffold_21: 3529705-3534704 Glycine max
Glyma.U022000 5.0kb downstream 5.0kb downstream 12728 true scaffold_21: 3534705-3547432 Glycine max
Glyma.U022000 5.0kb downstream 5.0kb downstream 5000 false scaffold_21: 3542433-3547432 Glycine max
Glyma.U022000 10.0kb upstream 10.0kb upstream 17728 true scaffold_21: 3524705-3542432 Glycine max
Glyma.U022000 10.0kb upstream 10.0kb upstream 10000 false scaffold_21: 3524705-3534704 Glycine max
Glyma.U022000 10.0kb downstream 10.0kb downstream 17728 true scaffold_21: 3534705-3552432 Glycine max
Glyma.U022000 10.0kb downstream 10.0kb downstream 10000 false scaffold_21: 3542433-3552432 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303044 5265 Fabidae View MSA
124065287 5270 Rosid View MSA
123744050 5271 Pentapetalae View MSA
122786724 5272 Eudicot View MSA
122047613 5273 Angiosperm View MSA
121310773 5274 Embryophyte View MSA
123425722 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.967 0.0 79.1859   High
cufflinks 13.5582 0.0 47.7336    
cufflinks 22.3973 0.0 88.1812 High High
cufflinks 11.801 0.0 46.3346   Low
cufflinks 12.6225 0.0 44.0463    
cufflinks 15.6627 0.0 63.141    
cufflinks 16.0751 0.0 57.8971    
cufflinks 12.3698 0.0 43.0578    
cufflinks 13.8697 0.0 54.8264    
cufflinks 3.731        
cufflinks 8.842     High High
cufflinks 4.489        
cufflinks 3.314       Low
cufflinks 3.203       Low
cufflinks 8.432     High High
cufflinks 5.616        
cufflinks 3.572       Low
cufflinks 4.152        
cufflinks 3.919        
cufflinks 5.869        
cufflinks 8.189     High High
cufflinks 5.743        
cufflinks 4.524        
cufflinks 8.28     High High
cufflinks 5.952        
cufflinks 6.909     High  

0 Strain