Gene : Glyma.U026800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23076:SF70 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED Genomic Order:  3
Name:  ? Glyma.U026800 Secondary Identifier:  ? PAC:30554302
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.U026800 0.5kb upstream 0.5kb upstream 13953 true scaffold_25: 656772-670724 Glycine max
Glyma.U026800 0.5kb upstream 0.5kb upstream 500 false scaffold_25: 656772-657271 Glycine max
Glyma.U026800 0.5kb downstream 0.5kb downstream 13953 true scaffold_25: 657272-671224 Glycine max
Glyma.U026800 0.5kb downstream 0.5kb downstream 500 false scaffold_25: 670725-671224 Glycine max
Glyma.U026800 1.0kb upstream 1.0kb upstream 14453 true scaffold_25: 656272-670724 Glycine max
Glyma.U026800 1.0kb upstream 1.0kb upstream 1000 false scaffold_25: 656272-657271 Glycine max
Glyma.U026800 1.0kb downstream 1.0kb downstream 14453 true scaffold_25: 657272-671724 Glycine max
Glyma.U026800 1.0kb downstream 1.0kb downstream 1000 false scaffold_25: 670725-671724 Glycine max
Glyma.U026800 2.0kb upstream 2.0kb upstream 15453 true scaffold_25: 655272-670724 Glycine max
Glyma.U026800 2.0kb upstream 2.0kb upstream 2000 false scaffold_25: 655272-657271 Glycine max
Glyma.U026800 2.0kb downstream 2.0kb downstream 15453 true scaffold_25: 657272-672724 Glycine max
Glyma.U026800 2.0kb downstream 2.0kb downstream 2000 false scaffold_25: 670725-672724 Glycine max
Glyma.U026800 5.0kb upstream 5.0kb upstream 18453 true scaffold_25: 652272-670724 Glycine max
Glyma.U026800 5.0kb upstream 5.0kb upstream 5000 false scaffold_25: 652272-657271 Glycine max
Glyma.U026800 5.0kb downstream 5.0kb downstream 18453 true scaffold_25: 657272-675724 Glycine max
Glyma.U026800 5.0kb downstream 5.0kb downstream 5000 false scaffold_25: 670725-675724 Glycine max
Glyma.U026800 10.0kb upstream 10.0kb upstream 23453 true scaffold_25: 647272-670724 Glycine max
Glyma.U026800 10.0kb upstream 10.0kb upstream 10000 false scaffold_25: 647272-657271 Glycine max
Glyma.U026800 10.0kb downstream 10.0kb downstream 23453 true scaffold_25: 657272-680724 Glycine max
Glyma.U026800 10.0kb downstream 10.0kb downstream 10000 false scaffold_25: 670725-680724 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122297668 5265 Fabidae View MSA
124036109 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.4617 0.0 90.8952 High High
cufflinks 9.91636 0.0 37.2139    
cufflinks 23.7072 0.0 92.0751 High High
cufflinks 11.1949 0.0 43.3773    
cufflinks 13.1255 0.0 46.6457    
cufflinks 23.7517 0.0 92.931 High High
cufflinks 6.31118 0.0 19.3312   Low
cufflinks 15.9068 0.0 57.7039    
cufflinks 12.7792 0.0 45.3624    
cufflinks 1.646        
cufflinks 2.114        
cufflinks 1.82        
cufflinks 1.709        
cufflinks 1.259       Low
cufflinks 2.077        
cufflinks 1.812        
cufflinks 1.504        
cufflinks 1.278       Low
cufflinks 2.058        
cufflinks 1.865        
cufflinks 2.003        
cufflinks 2.147        
cufflinks 1.631        
cufflinks 2.581       High
cufflinks 1.74        
cufflinks 2.901       High

0 Strain