Gene : Glyma.20G244400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22957:SF269 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  2444
Name:  ? Glyma.20G244400 Secondary Identifier:  ? PAC:30521806
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G244400 0.5kb upstream 0.5kb upstream 9124 true Chr20: 47452463-47461586 Glycine max
Glyma.20G244400 0.5kb upstream 0.5kb upstream 500 false Chr20: 47452463-47452962 Glycine max
Glyma.20G244400 0.5kb downstream 0.5kb downstream 9124 true Chr20: 47452963-47462086 Glycine max
Glyma.20G244400 0.5kb downstream 0.5kb downstream 500 false Chr20: 47461587-47462086 Glycine max
Glyma.20G244400 1.0kb upstream 1.0kb upstream 9624 true Chr20: 47451963-47461586 Glycine max
Glyma.20G244400 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47451963-47452962 Glycine max
Glyma.20G244400 1.0kb downstream 1.0kb downstream 9624 true Chr20: 47452963-47462586 Glycine max
Glyma.20G244400 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47461587-47462586 Glycine max
Glyma.20G244400 2.0kb upstream 2.0kb upstream 10624 true Chr20: 47450963-47461586 Glycine max
Glyma.20G244400 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47450963-47452962 Glycine max
Glyma.20G244400 2.0kb downstream 2.0kb downstream 10624 true Chr20: 47452963-47463586 Glycine max
Glyma.20G244400 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47461587-47463586 Glycine max
Glyma.20G244400 5.0kb upstream 5.0kb upstream 13624 true Chr20: 47447963-47461586 Glycine max
Glyma.20G244400 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47447963-47452962 Glycine max
Glyma.20G244400 5.0kb downstream 5.0kb downstream 13624 true Chr20: 47452963-47466586 Glycine max
Glyma.20G244400 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47461587-47466586 Glycine max
Glyma.20G244400 10.0kb upstream 10.0kb upstream 18624 true Chr20: 47442963-47461586 Glycine max
Glyma.20G244400 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47442963-47452962 Glycine max
Glyma.20G244400 10.0kb downstream 10.0kb downstream 18624 true Chr20: 47452963-47471586 Glycine max
Glyma.20G244400 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47461587-47471586 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300912 5265 Fabidae View MSA
124063524 5270 Rosid View MSA
123740176 5271 Pentapetalae View MSA
122795755 5272 Eudicot View MSA
122044400 5273 Angiosperm View MSA
121345248 5274 Embryophyte View MSA
123428184 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.9965 0.0 21.3369    
cufflinks 5.58152 0.0 15.0254   Low
cufflinks 4.8794 0.0 13.1974   Low
cufflinks 12.1488 0.0 32.6502   High
cufflinks 10.6629 0.0 28.5235    
cufflinks 5.92761 0.0 15.9183    
cufflinks 8.09942 0.0 21.6119    
cufflinks 12.9532 0.0 34.898   High
cufflinks 10.4341 0.0 27.8974    
cufflinks 5.74       High
cufflinks 2.677        
cufflinks 2.849        
cufflinks 6.011       High
cufflinks 7.302     High High
cufflinks 4.815        
cufflinks 2.596       Low
cufflinks 7.317     High High
cufflinks 4.677        
cufflinks 3.273        
cufflinks 2.542       Low
cufflinks 4.21        
cufflinks 2.837        
cufflinks 3.238        
cufflinks 2.873        
cufflinks 2.59       Low
cufflinks 4.027        

0 Strain