Gene : Glyma.20G248900 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR13832:SF286 - PROTEIN PHOSPHATASE 2C 33-RELATED Genomic Order:  2489
Name:  ? Glyma.20G248900 Secondary Identifier:  ? PAC:30520519
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G248900 0.5kb upstream 0.5kb upstream 6182 true Chr20: 47789042-47795223 Glycine max
Glyma.20G248900 0.5kb upstream 0.5kb upstream 500 false Chr20: 47794724-47795223 Glycine max
Glyma.20G248900 0.5kb downstream 0.5kb downstream 6182 true Chr20: 47788542-47794723 Glycine max
Glyma.20G248900 0.5kb downstream 0.5kb downstream 500 false Chr20: 47788542-47789041 Glycine max
Glyma.20G248900 1.0kb upstream 1.0kb upstream 6682 true Chr20: 47789042-47795723 Glycine max
Glyma.20G248900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47794724-47795723 Glycine max
Glyma.20G248900 1.0kb downstream 1.0kb downstream 6682 true Chr20: 47788042-47794723 Glycine max
Glyma.20G248900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47788042-47789041 Glycine max
Glyma.20G248900 2.0kb upstream 2.0kb upstream 7682 true Chr20: 47789042-47796723 Glycine max
Glyma.20G248900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47794724-47796723 Glycine max
Glyma.20G248900 2.0kb downstream 2.0kb downstream 7682 true Chr20: 47787042-47794723 Glycine max
Glyma.20G248900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47787042-47789041 Glycine max
Glyma.20G248900 5.0kb upstream 5.0kb upstream 10682 true Chr20: 47789042-47799723 Glycine max
Glyma.20G248900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47794724-47799723 Glycine max
Glyma.20G248900 5.0kb downstream 5.0kb downstream 10682 true Chr20: 47784042-47794723 Glycine max
Glyma.20G248900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47784042-47789041 Glycine max
Glyma.20G248900 10.0kb upstream 10.0kb upstream 15682 true Chr20: 47789042-47804723 Glycine max
Glyma.20G248900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47794724-47804723 Glycine max
Glyma.20G248900 10.0kb downstream 10.0kb downstream 15682 true Chr20: 47779042-47794723 Glycine max
Glyma.20G248900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47779042-47789041 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656291 5273 Angiosperm View MSA
122298031 5265 Fabidae View MSA
124036278 5270 Rosid View MSA
123609647 5271 Pentapetalae View MSA
122644291 5272 Eudicot View MSA
120928373 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.792357 0.0 26.0652    
cufflinks 0.351422 0.0 41.1756    
cufflinks 25.3048 0.0 99.1069 High High
cufflinks 0.384329 0.0 4.52601    
cufflinks 0.75978 0.0 29.8937    
cufflinks 0.564038 0.0 5.81356    
cufflinks 0.928011 0.0 7.1776    
cufflinks 1.44706 0.0 34.8606    
cufflinks 0.633013 0.0 5.8288    
cufflinks 0.218        
cufflinks 1.817       High
cufflinks 0.986        
cufflinks 0.13        
cufflinks 0.117       Low
cufflinks 0.217        
cufflinks 0.406        
cufflinks 0.248        
cufflinks 1.486       High
cufflinks 0.056     Low Low
cufflinks 0.525        
cufflinks 0.923        
cufflinks 0.221        
cufflinks 0.047     Low Low
cufflinks 1.664       High
cufflinks 0.632        
cufflinks 0.77        

0 Strain