Gene : Glyma.20G243600 G. max Wm82.a2.v1
Defline:  (1 of 120) PF13839//PF14416 - GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p (PC-Esterase) // PMR5 N terminal Domain (PMR5N) Genomic Order:  2436
Name:  ? Glyma.20G243600 Secondary Identifier:  ? PAC:30521978
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G243600 0.5kb upstream 0.5kb upstream 3611 true Chr20: 47395403-47399013 Glycine max
Glyma.20G243600 0.5kb upstream 0.5kb upstream 500 false Chr20: 47398514-47399013 Glycine max
Glyma.20G243600 0.5kb downstream 0.5kb downstream 3611 true Chr20: 47394903-47398513 Glycine max
Glyma.20G243600 0.5kb downstream 0.5kb downstream 500 false Chr20: 47394903-47395402 Glycine max
Glyma.20G243600 1.0kb upstream 1.0kb upstream 4111 true Chr20: 47395403-47399513 Glycine max
Glyma.20G243600 1.0kb upstream 1.0kb upstream 1000 false Chr20: 47398514-47399513 Glycine max
Glyma.20G243600 1.0kb downstream 1.0kb downstream 4111 true Chr20: 47394403-47398513 Glycine max
Glyma.20G243600 1.0kb downstream 1.0kb downstream 1000 false Chr20: 47394403-47395402 Glycine max
Glyma.20G243600 2.0kb upstream 2.0kb upstream 5111 true Chr20: 47395403-47400513 Glycine max
Glyma.20G243600 2.0kb upstream 2.0kb upstream 2000 false Chr20: 47398514-47400513 Glycine max
Glyma.20G243600 2.0kb downstream 2.0kb downstream 5111 true Chr20: 47393403-47398513 Glycine max
Glyma.20G243600 2.0kb downstream 2.0kb downstream 2000 false Chr20: 47393403-47395402 Glycine max
Glyma.20G243600 5.0kb upstream 5.0kb upstream 8111 true Chr20: 47395403-47403513 Glycine max
Glyma.20G243600 5.0kb upstream 5.0kb upstream 5000 false Chr20: 47398514-47403513 Glycine max
Glyma.20G243600 5.0kb downstream 5.0kb downstream 8111 true Chr20: 47390403-47398513 Glycine max
Glyma.20G243600 5.0kb downstream 5.0kb downstream 5000 false Chr20: 47390403-47395402 Glycine max
Glyma.20G243600 10.0kb upstream 10.0kb upstream 13111 true Chr20: 47395403-47408513 Glycine max
Glyma.20G243600 10.0kb upstream 10.0kb upstream 10000 false Chr20: 47398514-47408513 Glycine max
Glyma.20G243600 10.0kb downstream 10.0kb downstream 13111 true Chr20: 47385403-47398513 Glycine max
Glyma.20G243600 10.0kb downstream 10.0kb downstream 10000 false Chr20: 47385403-47395402 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312947 5265 Fabidae View MSA
124074149 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0793402 0.0 0.316147 Low  
cufflinks 0.215177 0.0 0.823567    
cufflinks 0.24166 0.0 0.921529    
cufflinks 0.0102389 0.0 0.0470393 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.264418 0.0 1.00583    
cufflinks 0.0801749 0.0 0.319225 Low  
cufflinks 0.0350705 0.0 0.145172 Low  
cufflinks 0.005     Low Low
cufflinks 0.006     Low Low
cufflinks 0.208       High
cufflinks 0.027     Low  
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.006     Low Low
cufflinks 1.125       High
cufflinks 0.06     Low  
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 0.069     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.04     Low  
cufflinks 0.005     Low Low

0 Strain