Gene : Glyma.20G156200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32295:SF11 - IQ-DOMAIN 24 PROTEIN Genomic Order:  1562
Name:  ? Glyma.20G156200 Secondary Identifier:  ? PAC:30520140
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G156200 0.5kb upstream 0.5kb upstream 5222 true Chr20: 39504847-39510068 Glycine max
Glyma.20G156200 0.5kb upstream 0.5kb upstream 500 false Chr20: 39504847-39505346 Glycine max
Glyma.20G156200 0.5kb downstream 0.5kb downstream 5222 true Chr20: 39505347-39510568 Glycine max
Glyma.20G156200 0.5kb downstream 0.5kb downstream 500 false Chr20: 39510069-39510568 Glycine max
Glyma.20G156200 1.0kb upstream 1.0kb upstream 5722 true Chr20: 39504347-39510068 Glycine max
Glyma.20G156200 1.0kb upstream 1.0kb upstream 1000 false Chr20: 39504347-39505346 Glycine max
Glyma.20G156200 1.0kb downstream 1.0kb downstream 5722 true Chr20: 39505347-39511068 Glycine max
Glyma.20G156200 1.0kb downstream 1.0kb downstream 1000 false Chr20: 39510069-39511068 Glycine max
Glyma.20G156200 2.0kb upstream 2.0kb upstream 6722 true Chr20: 39503347-39510068 Glycine max
Glyma.20G156200 2.0kb upstream 2.0kb upstream 2000 false Chr20: 39503347-39505346 Glycine max
Glyma.20G156200 2.0kb downstream 2.0kb downstream 6722 true Chr20: 39505347-39512068 Glycine max
Glyma.20G156200 2.0kb downstream 2.0kb downstream 2000 false Chr20: 39510069-39512068 Glycine max
Glyma.20G156200 5.0kb upstream 5.0kb upstream 9722 true Chr20: 39500347-39510068 Glycine max
Glyma.20G156200 5.0kb upstream 5.0kb upstream 5000 false Chr20: 39500347-39505346 Glycine max
Glyma.20G156200 5.0kb downstream 5.0kb downstream 9722 true Chr20: 39505347-39515068 Glycine max
Glyma.20G156200 5.0kb downstream 5.0kb downstream 5000 false Chr20: 39510069-39515068 Glycine max
Glyma.20G156200 10.0kb upstream 10.0kb upstream 14722 true Chr20: 39495347-39510068 Glycine max
Glyma.20G156200 10.0kb upstream 10.0kb upstream 10000 false Chr20: 39495347-39505346 Glycine max
Glyma.20G156200 10.0kb downstream 10.0kb downstream 14722 true Chr20: 39505347-39520068 Glycine max
Glyma.20G156200 10.0kb downstream 10.0kb downstream 10000 false Chr20: 39510069-39520068 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310134 5265 Fabidae View MSA
124069583 5270 Rosid View MSA
123743789 5271 Pentapetalae View MSA
122786038 5272 Eudicot View MSA
122048614 5273 Angiosperm View MSA
121311038 5274 Embryophyte View MSA
123348392 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.44995 0.0 30.5021    
cufflinks 8.85331 0.0 35.3592    
cufflinks 3.47153 0.0 15.902    
cufflinks 24.7637 0.0 95.1259 High High
cufflinks 2.81649 0.0 12.2272    
cufflinks 0.872161 0.0 5.05142   Low
cufflinks 4.16451 0.0 18.0751    
cufflinks 9.24519 0.0 36.5535    
cufflinks 4.48844 0.0 18.9395    
cufflinks 0.947        
cufflinks 0.224        
cufflinks 0.814        
cufflinks 0.12       Low
cufflinks 0.075       Low
cufflinks 0.249        
cufflinks 2.757       High
cufflinks 0.737        
cufflinks 1.024        
cufflinks 1.613        
cufflinks 2.222       High
cufflinks 0.162       Low
cufflinks 2.462       High
cufflinks 2.064       High
cufflinks 0.183        
cufflinks 2.203       High
cufflinks 0.206        

0 Strain