Gene : Glyma.20G106300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10527:SF3 - FI21453P1 Genomic Order:  1063
Name:  ? Glyma.20G106300 Secondary Identifier:  ? PAC:30522162
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G106300 0.5kb upstream 0.5kb upstream 16852 true Chr20: 34868954-34885805 Glycine max
Glyma.20G106300 0.5kb upstream 0.5kb upstream 500 false Chr20: 34885306-34885805 Glycine max
Glyma.20G106300 0.5kb downstream 0.5kb downstream 16852 true Chr20: 34868454-34885305 Glycine max
Glyma.20G106300 0.5kb downstream 0.5kb downstream 500 false Chr20: 34868454-34868953 Glycine max
Glyma.20G106300 1.0kb upstream 1.0kb upstream 17352 true Chr20: 34868954-34886305 Glycine max
Glyma.20G106300 1.0kb upstream 1.0kb upstream 1000 false Chr20: 34885306-34886305 Glycine max
Glyma.20G106300 1.0kb downstream 1.0kb downstream 17352 true Chr20: 34867954-34885305 Glycine max
Glyma.20G106300 1.0kb downstream 1.0kb downstream 1000 false Chr20: 34867954-34868953 Glycine max
Glyma.20G106300 2.0kb upstream 2.0kb upstream 18352 true Chr20: 34868954-34887305 Glycine max
Glyma.20G106300 2.0kb upstream 2.0kb upstream 2000 false Chr20: 34885306-34887305 Glycine max
Glyma.20G106300 2.0kb downstream 2.0kb downstream 18352 true Chr20: 34866954-34885305 Glycine max
Glyma.20G106300 2.0kb downstream 2.0kb downstream 2000 false Chr20: 34866954-34868953 Glycine max
Glyma.20G106300 5.0kb upstream 5.0kb upstream 21352 true Chr20: 34868954-34890305 Glycine max
Glyma.20G106300 5.0kb upstream 5.0kb upstream 5000 false Chr20: 34885306-34890305 Glycine max
Glyma.20G106300 5.0kb downstream 5.0kb downstream 21352 true Chr20: 34863954-34885305 Glycine max
Glyma.20G106300 5.0kb downstream 5.0kb downstream 5000 false Chr20: 34863954-34868953 Glycine max
Glyma.20G106300 10.0kb upstream 10.0kb upstream 26352 true Chr20: 34868954-34895305 Glycine max
Glyma.20G106300 10.0kb upstream 10.0kb upstream 10000 false Chr20: 34885306-34895305 Glycine max
Glyma.20G106300 10.0kb downstream 10.0kb downstream 26352 true Chr20: 34858954-34885305 Glycine max
Glyma.20G106300 10.0kb downstream 10.0kb downstream 10000 false Chr20: 34858954-34868953 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026329 5273 Angiosperm View MSA
122304393 5265 Fabidae View MSA
124064274 5270 Rosid View MSA
123739927 5271 Pentapetalae View MSA
122787120 5272 Eudicot View MSA
121344720 5274 Embryophyte View MSA
123426345 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.7771 0.0 48.6766    
cufflinks 14.9526 0.0 40.4763    
cufflinks 13.6026 0.0 36.6993    
cufflinks 31.8333 0.0 92.9888 High High
cufflinks 22.962 0.0 64.3978 High  
cufflinks 10.7429 0.0 28.7266   Low
cufflinks 25.9476 0.0 73.7109 High High
cufflinks 19.3517 0.0 53.3731    
cufflinks 18.2365 0.0 50.0885    
cufflinks 4.553       High
cufflinks 2.416        
cufflinks 3.339        
cufflinks 4.356       High
cufflinks 5.23       High
cufflinks 3.132        
cufflinks 2.701        
cufflinks 2.746        
cufflinks 4.795       High
cufflinks 3.391        
cufflinks 3.002        
cufflinks 3.097        
cufflinks 2.652        
cufflinks 2.154       Low
cufflinks 2.051       Low
cufflinks 2.987        
cufflinks 2.453        

0 Strain