Gene : Glyma.20G093900 G. max Wm82.a2.v1
Defline:  (1 of 5) 3.4.19.3 - Pyroglutamyl-peptidase I / Pyrrolidone-carboxylate peptidase Genomic Order:  939
Name:  ? Glyma.20G093900 Secondary Identifier:  ? PAC:30522920
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G093900 0.5kb upstream 0.5kb upstream 3933 true Chr20: 33700927-33704859 Glycine max
Glyma.20G093900 0.5kb upstream 0.5kb upstream 500 false Chr20: 33704360-33704859 Glycine max
Glyma.20G093900 0.5kb downstream 0.5kb downstream 3933 true Chr20: 33700427-33704359 Glycine max
Glyma.20G093900 0.5kb downstream 0.5kb downstream 500 false Chr20: 33700427-33700926 Glycine max
Glyma.20G093900 1.0kb upstream 1.0kb upstream 4433 true Chr20: 33700927-33705359 Glycine max
Glyma.20G093900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 33704360-33705359 Glycine max
Glyma.20G093900 1.0kb downstream 1.0kb downstream 4433 true Chr20: 33699927-33704359 Glycine max
Glyma.20G093900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 33699927-33700926 Glycine max
Glyma.20G093900 2.0kb upstream 2.0kb upstream 5433 true Chr20: 33700927-33706359 Glycine max
Glyma.20G093900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 33704360-33706359 Glycine max
Glyma.20G093900 2.0kb downstream 2.0kb downstream 5433 true Chr20: 33698927-33704359 Glycine max
Glyma.20G093900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 33698927-33700926 Glycine max
Glyma.20G093900 5.0kb upstream 5.0kb upstream 8433 true Chr20: 33700927-33709359 Glycine max
Glyma.20G093900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 33704360-33709359 Glycine max
Glyma.20G093900 5.0kb downstream 5.0kb downstream 8433 true Chr20: 33695927-33704359 Glycine max
Glyma.20G093900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 33695927-33700926 Glycine max
Glyma.20G093900 10.0kb upstream 10.0kb upstream 13433 true Chr20: 33700927-33714359 Glycine max
Glyma.20G093900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 33704360-33714359 Glycine max
Glyma.20G093900 10.0kb downstream 10.0kb downstream 13433 true Chr20: 33690927-33704359 Glycine max
Glyma.20G093900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 33690927-33700926 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026217 5273 Angiosperm View MSA
122311801 5265 Fabidae View MSA
124062104 5270 Rosid View MSA
123741081 5271 Pentapetalae View MSA
122790399 5272 Eudicot View MSA
121348835 5274 Embryophyte View MSA
123428644 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.0565 0.0 97.2012 High  
cufflinks 16.6396 0.0 58.2003   Low
cufflinks 35.6976 0.0 142.292 High  
cufflinks 20.344 0.0 78.4116 High  
cufflinks 35.8059 0.0 124.685 High  
cufflinks 105.655 0.0 483.61 High High
cufflinks 22.1434 0.0 76.0671 High  
cufflinks 28.3865 0.0 110.055 High  
cufflinks 47.938 0.0 177.718 High  
cufflinks 2.182        
cufflinks 5.745     High High
cufflinks 4.362        
cufflinks 4.708       High
cufflinks 0.93       Low
cufflinks 2.295        
cufflinks 1.605        
cufflinks 2.509        
cufflinks 1.859        
cufflinks 2.159        
cufflinks 2.482        
cufflinks 4.841       High
cufflinks 2.208        
cufflinks 1.199       Low
cufflinks 6.717     High High
cufflinks 2.247        
cufflinks 3.926        

0 Strain