Gene : Glyma.20G071000 G. max Wm82.a2.v1
Defline:  (1 of 25) PF00917 - MATH domain (MATH) Genomic Order:  710
Name:  ? Glyma.20G071000 Secondary Identifier:  ? PAC:30519529
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G071000 0.5kb upstream 0.5kb upstream 2744 true Chr20: 25298198-25300941 Glycine max
Glyma.20G071000 0.5kb upstream 0.5kb upstream 500 false Chr20: 25298198-25298697 Glycine max
Glyma.20G071000 0.5kb downstream 0.5kb downstream 2744 true Chr20: 25298698-25301441 Glycine max
Glyma.20G071000 0.5kb downstream 0.5kb downstream 500 false Chr20: 25300942-25301441 Glycine max
Glyma.20G071000 1.0kb upstream 1.0kb upstream 3244 true Chr20: 25297698-25300941 Glycine max
Glyma.20G071000 1.0kb upstream 1.0kb upstream 1000 false Chr20: 25297698-25298697 Glycine max
Glyma.20G071000 1.0kb downstream 1.0kb downstream 3244 true Chr20: 25298698-25301941 Glycine max
Glyma.20G071000 1.0kb downstream 1.0kb downstream 1000 false Chr20: 25300942-25301941 Glycine max
Glyma.20G071000 2.0kb upstream 2.0kb upstream 4244 true Chr20: 25296698-25300941 Glycine max
Glyma.20G071000 2.0kb upstream 2.0kb upstream 2000 false Chr20: 25296698-25298697 Glycine max
Glyma.20G071000 2.0kb downstream 2.0kb downstream 4244 true Chr20: 25298698-25302941 Glycine max
Glyma.20G071000 2.0kb downstream 2.0kb downstream 2000 false Chr20: 25300942-25302941 Glycine max
Glyma.20G071000 5.0kb upstream 5.0kb upstream 7244 true Chr20: 25293698-25300941 Glycine max
Glyma.20G071000 5.0kb upstream 5.0kb upstream 5000 false Chr20: 25293698-25298697 Glycine max
Glyma.20G071000 5.0kb downstream 5.0kb downstream 7244 true Chr20: 25298698-25305941 Glycine max
Glyma.20G071000 5.0kb downstream 5.0kb downstream 5000 false Chr20: 25300942-25305941 Glycine max
Glyma.20G071000 10.0kb upstream 10.0kb upstream 12244 true Chr20: 25288698-25300941 Glycine max
Glyma.20G071000 10.0kb upstream 10.0kb upstream 10000 false Chr20: 25288698-25298697 Glycine max
Glyma.20G071000 10.0kb downstream 10.0kb downstream 12244 true Chr20: 25298698-25310941 Glycine max
Glyma.20G071000 10.0kb downstream 10.0kb downstream 10000 false Chr20: 25300942-25310941 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121607177 5273 Angiosperm Singleton cluster - no MSA
122238401 5265 Fabidae Singleton cluster - no MSA
123983829 5270 Rosid Singleton cluster - no MSA
123559396 5271 Pentapetalae Singleton cluster - no MSA
122594202 5272 Eudicot Singleton cluster - no MSA
120879459 5274 Embryophyte Singleton cluster - no MSA
122920334 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.6225 0.0 5.88865    
cufflinks 2.59693 0.0 9.09855    
cufflinks 6.15318 0.0 19.4034   High
cufflinks 2.74381 0.0 9.56923    
cufflinks 1.49491 0.0 5.4569   Low
cufflinks 2.04788 0.0 7.31773    
cufflinks 2.17007 0.0 7.73305    
cufflinks 2.33471 0.0 8.25649    
cufflinks 2.46462 0.0 8.67821    
cufflinks 0.813        
cufflinks 0.491       Low
cufflinks 2.055       High
cufflinks 1.155        
cufflinks 0.8        
cufflinks 0.977        
cufflinks 0.811        
cufflinks 0.813        
cufflinks 1.565       High
cufflinks 1.342       High
cufflinks 0.658        
cufflinks 0.769        
cufflinks 0.808        
cufflinks 0.828        
cufflinks 0.631        
cufflinks 0.677        
cufflinks 1.034        

0 Strain