Gene : Glyma.20G029900 G. max Wm82.a2.v1
Defline:  (1 of 59) PF01107 - Viral movement protein (MP) (MP) Genomic Order:  299
Name:  ? Glyma.20G029900 Secondary Identifier:  ? PAC:30522071
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G029900 0.5kb upstream 0.5kb upstream 3063 true Chr20: 3575028-3578090 Glycine max
Glyma.20G029900 0.5kb upstream 0.5kb upstream 500 false Chr20: 3575028-3575527 Glycine max
Glyma.20G029900 0.5kb downstream 0.5kb downstream 3063 true Chr20: 3575528-3578590 Glycine max
Glyma.20G029900 0.5kb downstream 0.5kb downstream 500 false Chr20: 3578091-3578590 Glycine max
Glyma.20G029900 1.0kb upstream 1.0kb upstream 3563 true Chr20: 3574528-3578090 Glycine max
Glyma.20G029900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 3574528-3575527 Glycine max
Glyma.20G029900 1.0kb downstream 1.0kb downstream 3563 true Chr20: 3575528-3579090 Glycine max
Glyma.20G029900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 3578091-3579090 Glycine max
Glyma.20G029900 2.0kb upstream 2.0kb upstream 4563 true Chr20: 3573528-3578090 Glycine max
Glyma.20G029900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 3573528-3575527 Glycine max
Glyma.20G029900 2.0kb downstream 2.0kb downstream 4563 true Chr20: 3575528-3580090 Glycine max
Glyma.20G029900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 3578091-3580090 Glycine max
Glyma.20G029900 5.0kb upstream 5.0kb upstream 7563 true Chr20: 3570528-3578090 Glycine max
Glyma.20G029900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 3570528-3575527 Glycine max
Glyma.20G029900 5.0kb downstream 5.0kb downstream 7563 true Chr20: 3575528-3583090 Glycine max
Glyma.20G029900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 3578091-3583090 Glycine max
Glyma.20G029900 10.0kb upstream 10.0kb upstream 12563 true Chr20: 3565528-3578090 Glycine max
Glyma.20G029900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 3565528-3575527 Glycine max
Glyma.20G029900 10.0kb downstream 10.0kb downstream 12563 true Chr20: 3575528-3588090 Glycine max
Glyma.20G029900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 3578091-3588090 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028362 5273 Angiosperm View MSA
122250435 5265 Fabidae View MSA
124040401 5270 Rosid View MSA
123751157 5271 Pentapetalae View MSA
122773930 5272 Eudicot View MSA
121297863 5274 Embryophyte View MSA
123335877 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0601139 0.0 0.257206 Low  
cufflinks 0.0177493 0.0 0.0853391 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain