Gene : Glyma.20G046900 G. max Wm82.a2.v1
Genomic Order:  469 Name:  ? Glyma.20G046900
Secondary Identifier:  ? PAC:30520912
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G046900 0.5kb upstream 0.5kb upstream 2269 true Chr20: 8744272-8746540 Glycine max
Glyma.20G046900 0.5kb upstream 0.5kb upstream 500 false Chr20: 8746041-8746540 Glycine max
Glyma.20G046900 0.5kb downstream 0.5kb downstream 2269 true Chr20: 8743772-8746040 Glycine max
Glyma.20G046900 0.5kb downstream 0.5kb downstream 500 false Chr20: 8743772-8744271 Glycine max
Glyma.20G046900 1.0kb upstream 1.0kb upstream 2769 true Chr20: 8744272-8747040 Glycine max
Glyma.20G046900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 8746041-8747040 Glycine max
Glyma.20G046900 1.0kb downstream 1.0kb downstream 2769 true Chr20: 8743272-8746040 Glycine max
Glyma.20G046900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 8743272-8744271 Glycine max
Glyma.20G046900 2.0kb upstream 2.0kb upstream 3769 true Chr20: 8744272-8748040 Glycine max
Glyma.20G046900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 8746041-8748040 Glycine max
Glyma.20G046900 2.0kb downstream 2.0kb downstream 3769 true Chr20: 8742272-8746040 Glycine max
Glyma.20G046900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 8742272-8744271 Glycine max
Glyma.20G046900 5.0kb upstream 5.0kb upstream 6769 true Chr20: 8744272-8751040 Glycine max
Glyma.20G046900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 8746041-8751040 Glycine max
Glyma.20G046900 5.0kb downstream 5.0kb downstream 6769 true Chr20: 8739272-8746040 Glycine max
Glyma.20G046900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 8739272-8744271 Glycine max
Glyma.20G046900 10.0kb upstream 10.0kb upstream 11769 true Chr20: 8744272-8756040 Glycine max
Glyma.20G046900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 8746041-8756040 Glycine max
Glyma.20G046900 10.0kb downstream 10.0kb downstream 11769 true Chr20: 8734272-8746040 Glycine max
Glyma.20G046900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 8734272-8744271 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121607042 5273 Angiosperm Singleton cluster - no MSA
122238200 5265 Fabidae Singleton cluster - no MSA
123983657 5270 Rosid Singleton cluster - no MSA
123559249 5271 Pentapetalae Singleton cluster - no MSA
122594055 5272 Eudicot Singleton cluster - no MSA
120879326 5274 Embryophyte Singleton cluster - no MSA
122920202 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2128 0.0 61.9183   High
cufflinks 2.97069 0.0 11.7331   Low
cufflinks 6.5814 0.0 24.448    
cufflinks 3.82565 0.0 14.5387    
cufflinks 4.02338 0.0 15.5628    
cufflinks 8.03343 0.0 29.6942    
cufflinks 4.87463 0.0 23.5777    
cufflinks 5.2606 0.0 31.0586    
cufflinks 7.11463 0.0 44.5226    
cufflinks 0.856        
cufflinks 1.25       High
cufflinks 0.685        
cufflinks 0.332        
cufflinks 0.287       Low
cufflinks 1.958       High
cufflinks 0.304       Low
cufflinks 1.084       High
cufflinks 0.683        
cufflinks 0.263       Low
cufflinks 0.379        
cufflinks 0.427        
cufflinks 0.419        
cufflinks 0.483        
cufflinks 1.234       High
cufflinks 0.299       Low
cufflinks 0.988        

0 Strain