Gene : Glyma.20G016900 G. max Wm82.a2.v1
Defline:  (1 of 6) 2.4.2.10 - Orotate phosphoribosyltransferase / Orotidylic acid phosphorylase Genomic Order:  169
Name:  ? Glyma.20G016900 Secondary Identifier:  ? PAC:30522734
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY0-162 Glycine max pathologic  
Gmax PWY-5686 Glycine max pathologic  
Gmax PWY-7211 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.20G016900 0.5kb upstream 0.5kb upstream 4306 true Chr20: 1547718-1552023 Glycine max
Glyma.20G016900 0.5kb upstream 0.5kb upstream 500 false Chr20: 1551524-1552023 Glycine max
Glyma.20G016900 0.5kb downstream 0.5kb downstream 4306 true Chr20: 1547218-1551523 Glycine max
Glyma.20G016900 0.5kb downstream 0.5kb downstream 500 false Chr20: 1547218-1547717 Glycine max
Glyma.20G016900 1.0kb upstream 1.0kb upstream 4806 true Chr20: 1547718-1552523 Glycine max
Glyma.20G016900 1.0kb upstream 1.0kb upstream 1000 false Chr20: 1551524-1552523 Glycine max
Glyma.20G016900 1.0kb downstream 1.0kb downstream 4806 true Chr20: 1546718-1551523 Glycine max
Glyma.20G016900 1.0kb downstream 1.0kb downstream 1000 false Chr20: 1546718-1547717 Glycine max
Glyma.20G016900 2.0kb upstream 2.0kb upstream 5806 true Chr20: 1547718-1553523 Glycine max
Glyma.20G016900 2.0kb upstream 2.0kb upstream 2000 false Chr20: 1551524-1553523 Glycine max
Glyma.20G016900 2.0kb downstream 2.0kb downstream 5806 true Chr20: 1545718-1551523 Glycine max
Glyma.20G016900 2.0kb downstream 2.0kb downstream 2000 false Chr20: 1545718-1547717 Glycine max
Glyma.20G016900 5.0kb upstream 5.0kb upstream 8806 true Chr20: 1547718-1556523 Glycine max
Glyma.20G016900 5.0kb upstream 5.0kb upstream 5000 false Chr20: 1551524-1556523 Glycine max
Glyma.20G016900 5.0kb downstream 5.0kb downstream 8806 true Chr20: 1542718-1551523 Glycine max
Glyma.20G016900 5.0kb downstream 5.0kb downstream 5000 false Chr20: 1542718-1547717 Glycine max
Glyma.20G016900 10.0kb upstream 10.0kb upstream 13806 true Chr20: 1547718-1561523 Glycine max
Glyma.20G016900 10.0kb upstream 10.0kb upstream 10000 false Chr20: 1551524-1561523 Glycine max
Glyma.20G016900 10.0kb downstream 10.0kb downstream 13806 true Chr20: 1537718-1551523 Glycine max
Glyma.20G016900 10.0kb downstream 10.0kb downstream 10000 false Chr20: 1537718-1547717 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615323 5273 Angiosperm View MSA
122250152 5265 Fabidae View MSA
123993443 5270 Rosid View MSA
123568217 5271 Pentapetalae View MSA
122602964 5272 Eudicot View MSA
120887518 5274 Embryophyte View MSA
122928273 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.264298 0.0 1.06379    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.450509 0.0 1.77583    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain