Gene : Glyma.19G218500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12855:SF10 - DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 Genomic Order:  2185
Name:  ? Glyma.19G218500 Secondary Identifier:  ? PAC:30512106
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G218500 0.5kb upstream 0.5kb upstream 7915 true Chr19: 47106172-47114086 Glycine max
Glyma.19G218500 0.5kb upstream 0.5kb upstream 500 false Chr19: 47113587-47114086 Glycine max
Glyma.19G218500 0.5kb downstream 0.5kb downstream 7915 true Chr19: 47105672-47113586 Glycine max
Glyma.19G218500 0.5kb downstream 0.5kb downstream 500 false Chr19: 47105672-47106171 Glycine max
Glyma.19G218500 1.0kb upstream 1.0kb upstream 8415 true Chr19: 47106172-47114586 Glycine max
Glyma.19G218500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 47113587-47114586 Glycine max
Glyma.19G218500 1.0kb downstream 1.0kb downstream 8415 true Chr19: 47105172-47113586 Glycine max
Glyma.19G218500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 47105172-47106171 Glycine max
Glyma.19G218500 2.0kb upstream 2.0kb upstream 9415 true Chr19: 47106172-47115586 Glycine max
Glyma.19G218500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 47113587-47115586 Glycine max
Glyma.19G218500 2.0kb downstream 2.0kb downstream 9415 true Chr19: 47104172-47113586 Glycine max
Glyma.19G218500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 47104172-47106171 Glycine max
Glyma.19G218500 5.0kb upstream 5.0kb upstream 12415 true Chr19: 47106172-47118586 Glycine max
Glyma.19G218500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 47113587-47118586 Glycine max
Glyma.19G218500 5.0kb downstream 5.0kb downstream 12415 true Chr19: 47101172-47113586 Glycine max
Glyma.19G218500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 47101172-47106171 Glycine max
Glyma.19G218500 10.0kb upstream 10.0kb upstream 17415 true Chr19: 47106172-47123586 Glycine max
Glyma.19G218500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 47113587-47123586 Glycine max
Glyma.19G218500 10.0kb downstream 10.0kb downstream 17415 true Chr19: 47096172-47113586 Glycine max
Glyma.19G218500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 47096172-47106171 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301465 5265 Fabidae View MSA
124064017 5270 Rosid View MSA
123739698 5271 Pentapetalae View MSA
122786949 5272 Eudicot View MSA
122041546 5273 Angiosperm View MSA
123429045 5275 Viridiplantae View MSA
121347026 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.04429 0.0 19.9396   Low
cufflinks 11.1054 0.0 34.9589   High
cufflinks 8.99097 0.0 28.4889    
cufflinks 6.99606 0.0 22.3469    
cufflinks 6.64875 0.0 21.5061    
cufflinks 9.78006 0.0 31.0865    
cufflinks 8.66706 0.0 27.9246    
cufflinks 6.04106 0.0 20.7242   Low
cufflinks 8.2475 0.0 25.6995    
cufflinks 0.53       Low
cufflinks 0.733        
cufflinks 0.916        
cufflinks 0.774        
cufflinks 0.805        
cufflinks 0.676        
cufflinks 1.105        
cufflinks 0.456       Low
cufflinks 0.941        
cufflinks 1.244       High
cufflinks 1.097        
cufflinks 0.65        
cufflinks 1.127       High
cufflinks 1.146       High
cufflinks 0.793        
cufflinks 1.043        
cufflinks 0.594       Low

0 Strain