Gene : Glyma.04G119200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31707:SF45 - PECTINESTERASE/PECTINESTERASE INHIBITOR 33-RELATED Genomic Order:  1192
Name:  ? Glyma.04G119200 Secondary Identifier:  ? PAC:30488542
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-1081 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G119200 0.5kb upstream 0.5kb upstream 3214 true Chr04: 14316050-14319263 Glycine max
Glyma.04G119200 0.5kb upstream 0.5kb upstream 500 false Chr04: 14316050-14316549 Glycine max
Glyma.04G119200 0.5kb downstream 0.5kb downstream 3214 true Chr04: 14316550-14319763 Glycine max
Glyma.04G119200 0.5kb downstream 0.5kb downstream 500 false Chr04: 14319264-14319763 Glycine max
Glyma.04G119200 1.0kb upstream 1.0kb upstream 3714 true Chr04: 14315550-14319263 Glycine max
Glyma.04G119200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 14315550-14316549 Glycine max
Glyma.04G119200 1.0kb downstream 1.0kb downstream 3714 true Chr04: 14316550-14320263 Glycine max
Glyma.04G119200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 14319264-14320263 Glycine max
Glyma.04G119200 2.0kb upstream 2.0kb upstream 4714 true Chr04: 14314550-14319263 Glycine max
Glyma.04G119200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 14314550-14316549 Glycine max
Glyma.04G119200 2.0kb downstream 2.0kb downstream 4714 true Chr04: 14316550-14321263 Glycine max
Glyma.04G119200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 14319264-14321263 Glycine max
Glyma.04G119200 5.0kb upstream 5.0kb upstream 7714 true Chr04: 14311550-14319263 Glycine max
Glyma.04G119200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 14311550-14316549 Glycine max
Glyma.04G119200 5.0kb downstream 5.0kb downstream 7714 true Chr04: 14316550-14324263 Glycine max
Glyma.04G119200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 14319264-14324263 Glycine max
Glyma.04G119200 10.0kb upstream 10.0kb upstream 12714 true Chr04: 14306550-14319263 Glycine max
Glyma.04G119200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 14306550-14316549 Glycine max
Glyma.04G119200 10.0kb downstream 10.0kb downstream 12714 true Chr04: 14316550-14329263 Glycine max
Glyma.04G119200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 14319264-14329263 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032321 5273 Angiosperm View MSA
122316642 5265 Fabidae View MSA
124037915 5270 Rosid View MSA
123647914 5271 Pentapetalae View MSA
122681855 5272 Eudicot View MSA
121301230 5274 Embryophyte View MSA
123338900 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.237077 0.0 0.90997    
cufflinks 0.325614 0.0 1.23315    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0132763 0.0 0.0600484 Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104        
cufflinks 0.006     Low Low
cufflinks 0.151        
cufflinks 0.654       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.027     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.055     Low  

0 Strain