Gene : Glyma.04G114100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR32472:SF12 - P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  1141
Name:  ? Glyma.04G114100 Secondary Identifier:  ? PAC:30491055
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G114100 0.5kb upstream 0.5kb upstream 4073 true Chr04: 12958965-12963037 Glycine max
Glyma.04G114100 0.5kb upstream 0.5kb upstream 500 false Chr04: 12958965-12959464 Glycine max
Glyma.04G114100 0.5kb downstream 0.5kb downstream 4073 true Chr04: 12959465-12963537 Glycine max
Glyma.04G114100 0.5kb downstream 0.5kb downstream 500 false Chr04: 12963038-12963537 Glycine max
Glyma.04G114100 1.0kb upstream 1.0kb upstream 4573 true Chr04: 12958465-12963037 Glycine max
Glyma.04G114100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 12958465-12959464 Glycine max
Glyma.04G114100 1.0kb downstream 1.0kb downstream 4573 true Chr04: 12959465-12964037 Glycine max
Glyma.04G114100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 12963038-12964037 Glycine max
Glyma.04G114100 2.0kb upstream 2.0kb upstream 5573 true Chr04: 12957465-12963037 Glycine max
Glyma.04G114100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 12957465-12959464 Glycine max
Glyma.04G114100 2.0kb downstream 2.0kb downstream 5573 true Chr04: 12959465-12965037 Glycine max
Glyma.04G114100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 12963038-12965037 Glycine max
Glyma.04G114100 5.0kb upstream 5.0kb upstream 8573 true Chr04: 12954465-12963037 Glycine max
Glyma.04G114100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 12954465-12959464 Glycine max
Glyma.04G114100 5.0kb downstream 5.0kb downstream 8573 true Chr04: 12959465-12968037 Glycine max
Glyma.04G114100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 12963038-12968037 Glycine max
Glyma.04G114100 10.0kb upstream 10.0kb upstream 13573 true Chr04: 12949465-12963037 Glycine max
Glyma.04G114100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 12949465-12959464 Glycine max
Glyma.04G114100 10.0kb downstream 10.0kb downstream 13573 true Chr04: 12959465-12973037 Glycine max
Glyma.04G114100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 12963038-12973037 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122238884 5265 Fabidae Singleton cluster - no MSA
124065524 5270 Rosid View MSA
123737652 5271 Pentapetalae View MSA
122786963 5272 Eudicot View MSA
122047547 5273 Angiosperm View MSA
121351072 5274 Embryophyte View MSA
123381998 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0587238 0.0 0.230784 Low Low
cufflinks 3.93111 0.0 10.8079   High
cufflinks 0.196662 0.0 0.731822 Low  
cufflinks 0.212936 0.0 0.790739    
cufflinks 1.21558 0.0 3.87542    
cufflinks 0.837563 0.0 2.79961    
cufflinks 3.2707 0.0 9.15719   High
cufflinks 0.477076 0.0 1.68394    
cufflinks 0.710595 0.0 2.42148    
cufflinks 1.79       High
cufflinks 0.016     Low Low
cufflinks 0.505        
cufflinks 0.896        
cufflinks 1.197       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.251        
cufflinks 0.012     Low Low
cufflinks 1.005        
cufflinks 3.211       High
cufflinks 0.047     Low  
cufflinks 0.03     Low  
cufflinks 0.097        
cufflinks 0.083     Low  
cufflinks 0.011     Low Low
cufflinks 0.155        
cufflinks 0.114        

0 Strain