Gene : Glyma.04G233400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR14221:SF1 - TRANSDUCIN/WD40 DOMAIN-CONTAINING PROTEIN Genomic Order:  2334
Name:  ? Glyma.04G233400 Secondary Identifier:  ? PAC:30487819
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G233400 0.5kb upstream 0.5kb upstream 5563 true Chr04: 50211906-50217468 Glycine max
Glyma.04G233400 0.5kb upstream 0.5kb upstream 500 false Chr04: 50211906-50212405 Glycine max
Glyma.04G233400 0.5kb downstream 0.5kb downstream 5563 true Chr04: 50212406-50217968 Glycine max
Glyma.04G233400 0.5kb downstream 0.5kb downstream 500 false Chr04: 50217469-50217968 Glycine max
Glyma.04G233400 1.0kb upstream 1.0kb upstream 6063 true Chr04: 50211406-50217468 Glycine max
Glyma.04G233400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 50211406-50212405 Glycine max
Glyma.04G233400 1.0kb downstream 1.0kb downstream 6063 true Chr04: 50212406-50218468 Glycine max
Glyma.04G233400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 50217469-50218468 Glycine max
Glyma.04G233400 2.0kb upstream 2.0kb upstream 7063 true Chr04: 50210406-50217468 Glycine max
Glyma.04G233400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 50210406-50212405 Glycine max
Glyma.04G233400 2.0kb downstream 2.0kb downstream 7063 true Chr04: 50212406-50219468 Glycine max
Glyma.04G233400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 50217469-50219468 Glycine max
Glyma.04G233400 5.0kb upstream 5.0kb upstream 10063 true Chr04: 50207406-50217468 Glycine max
Glyma.04G233400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 50207406-50212405 Glycine max
Glyma.04G233400 5.0kb downstream 5.0kb downstream 10063 true Chr04: 50212406-50222468 Glycine max
Glyma.04G233400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 50217469-50222468 Glycine max
Glyma.04G233400 10.0kb upstream 10.0kb upstream 15063 true Chr04: 50202406-50217468 Glycine max
Glyma.04G233400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 50202406-50212405 Glycine max
Glyma.04G233400 10.0kb downstream 10.0kb downstream 15063 true Chr04: 50212406-50227468 Glycine max
Glyma.04G233400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 50217469-50227468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311532 5265 Fabidae View MSA
124060751 5270 Rosid View MSA
123745945 5271 Pentapetalae View MSA
122797236 5272 Eudicot View MSA
122045221 5273 Angiosperm View MSA
123429146 5275 Viridiplantae View MSA
121350952 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.11124 0.0 12.0441    
cufflinks 3.59604 0.0 13.4241    
cufflinks 2.57044 0.0 10.4137   Low
cufflinks 4.36604 0.0 15.7132    
cufflinks 4.91947 0.0 19.4625   High
cufflinks 4.32152 0.0 15.5496    
cufflinks 2.10806 0.0 7.80277   Low
cufflinks 3.96981 0.0 14.4888    
cufflinks 3.31804 0.0 12.5339    
cufflinks 1.778        
cufflinks 1.199        
cufflinks 1.542        
cufflinks 1.284        
cufflinks 1.509        
cufflinks 1.24        
cufflinks 1.228        
cufflinks 3.763       High
cufflinks 2.281        
cufflinks 1.36        
cufflinks 0.911       Low
cufflinks 2.215        
cufflinks 1.203        
cufflinks 1.378        
cufflinks 1.885        
cufflinks 0.912       Low
cufflinks 5.147       High

0 Strain