Gene : Glyma.04G192300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12741:SF5 - CALLOSE SYNTHASE 10 Genomic Order:  1923
Name:  ? Glyma.04G192300 Secondary Identifier:  ? PAC:30488200
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G192300 0.5kb upstream 0.5kb upstream 59270 true Chr04: 46344683-46403952 Glycine max
Glyma.04G192300 0.5kb upstream 0.5kb upstream 500 false Chr04: 46403453-46403952 Glycine max
Glyma.04G192300 0.5kb downstream 0.5kb downstream 59270 true Chr04: 46344183-46403452 Glycine max
Glyma.04G192300 0.5kb downstream 0.5kb downstream 500 false Chr04: 46344183-46344682 Glycine max
Glyma.04G192300 1.0kb upstream 1.0kb upstream 59770 true Chr04: 46344683-46404452 Glycine max
Glyma.04G192300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 46403453-46404452 Glycine max
Glyma.04G192300 1.0kb downstream 1.0kb downstream 59770 true Chr04: 46343683-46403452 Glycine max
Glyma.04G192300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 46343683-46344682 Glycine max
Glyma.04G192300 2.0kb upstream 2.0kb upstream 60770 true Chr04: 46344683-46405452 Glycine max
Glyma.04G192300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 46403453-46405452 Glycine max
Glyma.04G192300 2.0kb downstream 2.0kb downstream 60770 true Chr04: 46342683-46403452 Glycine max
Glyma.04G192300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 46342683-46344682 Glycine max
Glyma.04G192300 5.0kb upstream 5.0kb upstream 63770 true Chr04: 46344683-46408452 Glycine max
Glyma.04G192300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 46403453-46408452 Glycine max
Glyma.04G192300 5.0kb downstream 5.0kb downstream 63770 true Chr04: 46339683-46403452 Glycine max
Glyma.04G192300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 46339683-46344682 Glycine max
Glyma.04G192300 10.0kb upstream 10.0kb upstream 68770 true Chr04: 46344683-46413452 Glycine max
Glyma.04G192300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 46403453-46413452 Glycine max
Glyma.04G192300 10.0kb downstream 10.0kb downstream 68770 true Chr04: 46334683-46403452 Glycine max
Glyma.04G192300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 46334683-46344682 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313418 5265 Fabidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.36348 0.0 25.3579    
cufflinks 12.4075 0.0 34.3414    
cufflinks 10.1878 0.0 27.8363    
cufflinks 14.925 0.0 42.1292   High
cufflinks 10.1237 0.0 27.5318    
cufflinks 5.0921 0.0 13.5878   Low
cufflinks 16.3075 0.0 46.3392   High
cufflinks 9.71835 0.0 26.3902    
cufflinks 10.0289 0.0 27.2908    
cufflinks 1.221        
cufflinks 1.556        
cufflinks 1.176        
cufflinks 1.062       Low
cufflinks 1.133        
cufflinks 1.935       High
cufflinks 1.784       High
cufflinks 0.872       Low
cufflinks 1.67        
cufflinks 1.808       High
cufflinks 1.309        
cufflinks 1.62        
cufflinks 1.599        
cufflinks 1.201        
cufflinks 1.438        
cufflinks 1.433        
cufflinks 1.472        

0 Strain