Gene : Glyma.04G008400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR22298:SF29 - ENDOGLUCANASE 22-RELATED Genomic Order:  84
Name:  ? Glyma.04G008400 Secondary Identifier:  ? PAC:30489036
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G008400 0.5kb upstream 0.5kb upstream 4723 true Chr04: 639941-644663 Glycine max
Glyma.04G008400 0.5kb upstream 0.5kb upstream 500 false Chr04: 644164-644663 Glycine max
Glyma.04G008400 0.5kb downstream 0.5kb downstream 4723 true Chr04: 639441-644163 Glycine max
Glyma.04G008400 0.5kb downstream 0.5kb downstream 500 false Chr04: 639441-639940 Glycine max
Glyma.04G008400 1.0kb upstream 1.0kb upstream 5223 true Chr04: 639941-645163 Glycine max
Glyma.04G008400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 644164-645163 Glycine max
Glyma.04G008400 1.0kb downstream 1.0kb downstream 5223 true Chr04: 638941-644163 Glycine max
Glyma.04G008400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 638941-639940 Glycine max
Glyma.04G008400 2.0kb upstream 2.0kb upstream 6223 true Chr04: 639941-646163 Glycine max
Glyma.04G008400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 644164-646163 Glycine max
Glyma.04G008400 2.0kb downstream 2.0kb downstream 6223 true Chr04: 637941-644163 Glycine max
Glyma.04G008400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 637941-639940 Glycine max
Glyma.04G008400 5.0kb upstream 5.0kb upstream 9223 true Chr04: 639941-649163 Glycine max
Glyma.04G008400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 644164-649163 Glycine max
Glyma.04G008400 5.0kb downstream 5.0kb downstream 9223 true Chr04: 634941-644163 Glycine max
Glyma.04G008400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 634941-639940 Glycine max
Glyma.04G008400 10.0kb upstream 10.0kb upstream 14223 true Chr04: 639941-654163 Glycine max
Glyma.04G008400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 644164-654163 Glycine max
Glyma.04G008400 10.0kb downstream 10.0kb downstream 14223 true Chr04: 629941-644163 Glycine max
Glyma.04G008400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 629941-639940 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304025 5265 Fabidae View MSA
124074876 5270 Rosid View MSA
123753094 5271 Pentapetalae View MSA
122792910 5272 Eudicot View MSA
122045461 5273 Angiosperm View MSA
121349892 5274 Embryophyte View MSA
123381487 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.526789 0.0 1.93032    
cufflinks 1.45706 0.0 4.92814    
cufflinks 0.0848082 0.0 0.336574 Low Low
cufflinks 1.89069 0.0 6.18015    
cufflinks 1.56837 0.0 5.24432    
cufflinks 0.329333 0.0 1.23568    
cufflinks 2.419 0.0 7.62302    
cufflinks 4.91323 0.0 14.07   High
cufflinks 3.56642 0.0 10.6413    
cufflinks 6.069       High
cufflinks 0.247        
cufflinks 0.274        
cufflinks 0.596        
cufflinks 0.414        
cufflinks 0.107       Low
cufflinks 0.733        
cufflinks 0.323        
cufflinks 1.111        
cufflinks 0.337        
cufflinks 1.105        
cufflinks 0.445        
cufflinks 1.118        
cufflinks 0.895        
cufflinks 0.185       Low
cufflinks 1.015        
cufflinks 0.341        

0 Strain