Gene : Glyma.04G045900 G. max Wm82.a2.v1
Defline:  (1 of 4) PF15811 - Small VCP/p97-interacting protein (SVIP) Genomic Order:  459
Name:  ? Glyma.04G045900 Secondary Identifier:  ? PAC:30487297
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G045900 0.5kb upstream 0.5kb upstream 2606 true Chr04: 3671784-3674389 Glycine max
Glyma.04G045900 0.5kb upstream 0.5kb upstream 500 false Chr04: 3673890-3674389 Glycine max
Glyma.04G045900 0.5kb downstream 0.5kb downstream 2606 true Chr04: 3671284-3673889 Glycine max
Glyma.04G045900 0.5kb downstream 0.5kb downstream 500 false Chr04: 3671284-3671783 Glycine max
Glyma.04G045900 1.0kb upstream 1.0kb upstream 3106 true Chr04: 3671784-3674889 Glycine max
Glyma.04G045900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3673890-3674889 Glycine max
Glyma.04G045900 1.0kb downstream 1.0kb downstream 3106 true Chr04: 3670784-3673889 Glycine max
Glyma.04G045900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3670784-3671783 Glycine max
Glyma.04G045900 2.0kb upstream 2.0kb upstream 4106 true Chr04: 3671784-3675889 Glycine max
Glyma.04G045900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3673890-3675889 Glycine max
Glyma.04G045900 2.0kb downstream 2.0kb downstream 4106 true Chr04: 3669784-3673889 Glycine max
Glyma.04G045900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3669784-3671783 Glycine max
Glyma.04G045900 5.0kb upstream 5.0kb upstream 7106 true Chr04: 3671784-3678889 Glycine max
Glyma.04G045900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3673890-3678889 Glycine max
Glyma.04G045900 5.0kb downstream 5.0kb downstream 7106 true Chr04: 3666784-3673889 Glycine max
Glyma.04G045900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3666784-3671783 Glycine max
Glyma.04G045900 10.0kb upstream 10.0kb upstream 12106 true Chr04: 3671784-3683889 Glycine max
Glyma.04G045900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3673890-3683889 Glycine max
Glyma.04G045900 10.0kb downstream 10.0kb downstream 12106 true Chr04: 3661784-3673889 Glycine max
Glyma.04G045900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3661784-3671783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121655909 5273 Angiosperm View MSA
122296738 5265 Fabidae View MSA
124035761 5270 Rosid View MSA
123609231 5271 Pentapetalae View MSA
122643880 5272 Eudicot View MSA
120928006 5274 Embryophyte View MSA
122968639 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.911109 0.0 4.41892    
cufflinks 0.0623927 0.0 0.264153 Low  
cufflinks 0.0194669 0.0 0.0940313 Low Low
cufflinks 3.81276 0.0 13.6569   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.140623 0.0 0.565035 Low  
cufflinks 0.004     Low Low
cufflinks 1.049       High
cufflinks 0.058     Low  
cufflinks 0.085     Low  
cufflinks 0.046     Low  
cufflinks 0.381        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.375        
cufflinks 0.213        
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.199        
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.265        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.298        

0 Strain