Gene : Glyma.04G082000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21573:SF0 - ER MEMBRANE PROTEIN COMPLEX SUBUNIT 1 Genomic Order:  820
Name:  ? Glyma.04G082000 Secondary Identifier:  ? PAC:30487670
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G082000 0.5kb upstream 0.5kb upstream 8242 true Chr04: 6916238-6924479 Glycine max
Glyma.04G082000 0.5kb upstream 0.5kb upstream 500 false Chr04: 6923980-6924479 Glycine max
Glyma.04G082000 0.5kb downstream 0.5kb downstream 8242 true Chr04: 6915738-6923979 Glycine max
Glyma.04G082000 0.5kb downstream 0.5kb downstream 500 false Chr04: 6915738-6916237 Glycine max
Glyma.04G082000 1.0kb upstream 1.0kb upstream 8742 true Chr04: 6916238-6924979 Glycine max
Glyma.04G082000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 6923980-6924979 Glycine max
Glyma.04G082000 1.0kb downstream 1.0kb downstream 8742 true Chr04: 6915238-6923979 Glycine max
Glyma.04G082000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 6915238-6916237 Glycine max
Glyma.04G082000 2.0kb upstream 2.0kb upstream 9742 true Chr04: 6916238-6925979 Glycine max
Glyma.04G082000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 6923980-6925979 Glycine max
Glyma.04G082000 2.0kb downstream 2.0kb downstream 9742 true Chr04: 6914238-6923979 Glycine max
Glyma.04G082000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 6914238-6916237 Glycine max
Glyma.04G082000 5.0kb upstream 5.0kb upstream 12742 true Chr04: 6916238-6928979 Glycine max
Glyma.04G082000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 6923980-6928979 Glycine max
Glyma.04G082000 5.0kb downstream 5.0kb downstream 12742 true Chr04: 6911238-6923979 Glycine max
Glyma.04G082000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 6911238-6916237 Glycine max
Glyma.04G082000 10.0kb upstream 10.0kb upstream 17742 true Chr04: 6916238-6933979 Glycine max
Glyma.04G082000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 6923980-6933979 Glycine max
Glyma.04G082000 10.0kb downstream 10.0kb downstream 17742 true Chr04: 6906238-6923979 Glycine max
Glyma.04G082000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 6906238-6916237 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304423 5265 Fabidae View MSA
124063499 5270 Rosid View MSA
123736612 5271 Pentapetalae View MSA
122785753 5272 Eudicot View MSA
122044335 5273 Angiosperm View MSA
121345434 5274 Embryophyte View MSA
123428246 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.2496 0.0 49.5497    
cufflinks 15.3054 0.0 41.2003    
cufflinks 12.6753 0.0 33.9418   Low
cufflinks 19.9568 0.0 54.5666 High  
cufflinks 21.8728 0.0 60.1045 High High
cufflinks 17.3579 0.0 47.0147    
cufflinks 18.6261 0.0 50.5627    
cufflinks 19.7932 0.0 54.0914    
cufflinks 17.5232 0.0 47.4995    
cufflinks 9.146     High  
cufflinks 1.389       Low
cufflinks 6.961        
cufflinks 14.91     High High
cufflinks 17.464     High High
cufflinks 2.336       Low
cufflinks 5.513        
cufflinks 4.503        
cufflinks 9.52     High  
cufflinks 9.406     High  
cufflinks 4.476        
cufflinks 2.505       Low
cufflinks 5.625        
cufflinks 7.578     High  
cufflinks 3.243        
cufflinks 4.882        
cufflinks 2.934        

0 Strain