Gene : Glyma.04G027100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13233:SF0 - MICROSPHERULE PROTEIN 1 Genomic Order:  271
Name:  ? Glyma.04G027100 Secondary Identifier:  ? PAC:30490793
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G027100 0.5kb upstream 0.5kb upstream 6486 true Chr04: 2203674-2210159 Glycine max
Glyma.04G027100 0.5kb upstream 0.5kb upstream 500 false Chr04: 2209660-2210159 Glycine max
Glyma.04G027100 0.5kb downstream 0.5kb downstream 6486 true Chr04: 2203174-2209659 Glycine max
Glyma.04G027100 0.5kb downstream 0.5kb downstream 500 false Chr04: 2203174-2203673 Glycine max
Glyma.04G027100 1.0kb upstream 1.0kb upstream 6986 true Chr04: 2203674-2210659 Glycine max
Glyma.04G027100 1.0kb upstream 1.0kb upstream 1000 false Chr04: 2209660-2210659 Glycine max
Glyma.04G027100 1.0kb downstream 1.0kb downstream 6986 true Chr04: 2202674-2209659 Glycine max
Glyma.04G027100 1.0kb downstream 1.0kb downstream 1000 false Chr04: 2202674-2203673 Glycine max
Glyma.04G027100 2.0kb upstream 2.0kb upstream 7986 true Chr04: 2203674-2211659 Glycine max
Glyma.04G027100 2.0kb upstream 2.0kb upstream 2000 false Chr04: 2209660-2211659 Glycine max
Glyma.04G027100 2.0kb downstream 2.0kb downstream 7986 true Chr04: 2201674-2209659 Glycine max
Glyma.04G027100 2.0kb downstream 2.0kb downstream 2000 false Chr04: 2201674-2203673 Glycine max
Glyma.04G027100 5.0kb upstream 5.0kb upstream 10986 true Chr04: 2203674-2214659 Glycine max
Glyma.04G027100 5.0kb upstream 5.0kb upstream 5000 false Chr04: 2209660-2214659 Glycine max
Glyma.04G027100 5.0kb downstream 5.0kb downstream 10986 true Chr04: 2198674-2209659 Glycine max
Glyma.04G027100 5.0kb downstream 5.0kb downstream 5000 false Chr04: 2198674-2203673 Glycine max
Glyma.04G027100 10.0kb upstream 10.0kb upstream 15986 true Chr04: 2203674-2219659 Glycine max
Glyma.04G027100 10.0kb upstream 10.0kb upstream 10000 false Chr04: 2209660-2219659 Glycine max
Glyma.04G027100 10.0kb downstream 10.0kb downstream 15986 true Chr04: 2193674-2209659 Glycine max
Glyma.04G027100 10.0kb downstream 10.0kb downstream 10000 false Chr04: 2193674-2203673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305009 5265 Fabidae View MSA
124071163 5270 Rosid View MSA
123743662 5271 Pentapetalae View MSA
122794293 5272 Eudicot View MSA
122042078 5273 Angiosperm View MSA
121309918 5274 Embryophyte View MSA
123347549 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.02705 0.0 8.0722    
cufflinks 2.53705 0.0 9.22897    
cufflinks 0.903837 0.0 3.36814   Low
cufflinks 1.79612 0.0 5.55639    
cufflinks 1.76249 0.0 5.5519    
cufflinks 0.768761 0.0 3.05466   Low
cufflinks 3.07069 0.0 10.7148   High
cufflinks 1.47003 0.0 6.35661    
cufflinks 1.56759 0.0 6.682    
cufflinks 0.869       High
cufflinks 0.402        
cufflinks 0.553        
cufflinks 0.476        
cufflinks 0.544        
cufflinks 0.356        
cufflinks 0.307        
cufflinks 1.754       High
cufflinks 0.539        
cufflinks 0.962       High
cufflinks 0.117       Low
cufflinks 0.319        
cufflinks 0.215       Low
cufflinks 0.514        
cufflinks 0.228       Low
cufflinks 0.278        
cufflinks 0.718        

0 Strain