Gene : Glyma.04G012500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12565//PTHR12565:SF149 - STEROL REGULATORY ELEMENT-BINDING PROTEIN Genomic Order:  125
Name:  ? Glyma.04G012500 Secondary Identifier:  ? PAC:30490456
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G012500 0.5kb upstream 0.5kb upstream 2927 true Chr04: 923942-926868 Glycine max
Glyma.04G012500 0.5kb upstream 0.5kb upstream 500 false Chr04: 926369-926868 Glycine max
Glyma.04G012500 0.5kb downstream 0.5kb downstream 2927 true Chr04: 923442-926368 Glycine max
Glyma.04G012500 0.5kb downstream 0.5kb downstream 500 false Chr04: 923442-923941 Glycine max
Glyma.04G012500 1.0kb upstream 1.0kb upstream 3427 true Chr04: 923942-927368 Glycine max
Glyma.04G012500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 926369-927368 Glycine max
Glyma.04G012500 1.0kb downstream 1.0kb downstream 3427 true Chr04: 922942-926368 Glycine max
Glyma.04G012500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 922942-923941 Glycine max
Glyma.04G012500 2.0kb upstream 2.0kb upstream 4427 true Chr04: 923942-928368 Glycine max
Glyma.04G012500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 926369-928368 Glycine max
Glyma.04G012500 2.0kb downstream 2.0kb downstream 4427 true Chr04: 921942-926368 Glycine max
Glyma.04G012500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 921942-923941 Glycine max
Glyma.04G012500 5.0kb upstream 5.0kb upstream 7427 true Chr04: 923942-931368 Glycine max
Glyma.04G012500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 926369-931368 Glycine max
Glyma.04G012500 5.0kb downstream 5.0kb downstream 7427 true Chr04: 918942-926368 Glycine max
Glyma.04G012500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 918942-923941 Glycine max
Glyma.04G012500 10.0kb upstream 10.0kb upstream 12427 true Chr04: 923942-936368 Glycine max
Glyma.04G012500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 926369-936368 Glycine max
Glyma.04G012500 10.0kb downstream 10.0kb downstream 12427 true Chr04: 913942-926368 Glycine max
Glyma.04G012500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 913942-923941 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310623 5265 Fabidae View MSA
124065885 5270 Rosid View MSA
123741744 5271 Pentapetalae View MSA
122786731 5272 Eudicot View MSA
122048155 5273 Angiosperm View MSA
121350038 5274 Embryophyte View MSA
123381551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.7915 0.0 67.7515   High
cufflinks 2.67707 0.0 11.4017    
cufflinks 0.889919 0.0 5.8559    
cufflinks 0.383156 0.0 1.89855   Low
cufflinks 10.7884 0.0 40.7188   High
cufflinks 5.10766 0.0 20.1363    
cufflinks 0.170468 0.0 0.666708 Low Low
cufflinks 1.1365 0.0 7.35367    
cufflinks 6.58379 0.0 24.167    
cufflinks 0.428       Low
cufflinks 2.978        
cufflinks 0.588       Low
cufflinks 0.732        
cufflinks 1.695        
cufflinks 1.394        
cufflinks 2.806        
cufflinks 1.92        
cufflinks 0.776        
cufflinks 0.347       Low
cufflinks 2.381        
cufflinks 5.766     High High
cufflinks 1.737        
cufflinks 1.401        
cufflinks 2.428        
cufflinks 2.683        
cufflinks 6.702     High High

0 Strain