Gene : Glyma.04G180000 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11119:SF48 - NUCLEOBASE-ASCORBATE TRANSPORTER 5-RELATED Genomic Order:  1800
Name:  ? Glyma.04G180000 Secondary Identifier:  ? PAC:30490372
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.04G180000 0.5kb upstream 0.5kb upstream 9817 true Chr04: 44510562-44520378 Glycine max
Glyma.04G180000 0.5kb upstream 0.5kb upstream 500 false Chr04: 44519879-44520378 Glycine max
Glyma.04G180000 0.5kb downstream 0.5kb downstream 9817 true Chr04: 44510062-44519878 Glycine max
Glyma.04G180000 0.5kb downstream 0.5kb downstream 500 false Chr04: 44510062-44510561 Glycine max
Glyma.04G180000 1.0kb upstream 1.0kb upstream 10317 true Chr04: 44510562-44520878 Glycine max
Glyma.04G180000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 44519879-44520878 Glycine max
Glyma.04G180000 1.0kb downstream 1.0kb downstream 10317 true Chr04: 44509562-44519878 Glycine max
Glyma.04G180000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 44509562-44510561 Glycine max
Glyma.04G180000 2.0kb upstream 2.0kb upstream 11317 true Chr04: 44510562-44521878 Glycine max
Glyma.04G180000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 44519879-44521878 Glycine max
Glyma.04G180000 2.0kb downstream 2.0kb downstream 11317 true Chr04: 44508562-44519878 Glycine max
Glyma.04G180000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 44508562-44510561 Glycine max
Glyma.04G180000 5.0kb upstream 5.0kb upstream 14317 true Chr04: 44510562-44524878 Glycine max
Glyma.04G180000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 44519879-44524878 Glycine max
Glyma.04G180000 5.0kb downstream 5.0kb downstream 14317 true Chr04: 44505562-44519878 Glycine max
Glyma.04G180000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 44505562-44510561 Glycine max
Glyma.04G180000 10.0kb upstream 10.0kb upstream 19317 true Chr04: 44510562-44529878 Glycine max
Glyma.04G180000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 44519879-44529878 Glycine max
Glyma.04G180000 10.0kb downstream 10.0kb downstream 19317 true Chr04: 44500562-44519878 Glycine max
Glyma.04G180000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 44500562-44510561 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301396 5265 Fabidae View MSA
124067903 5270 Rosid View MSA
123745351 5271 Pentapetalae View MSA
122794781 5272 Eudicot View MSA
122049429 5273 Angiosperm View MSA
121311395 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.2592 0.0 49.4967   Low
cufflinks 29.6153 0.0 109.329 High  
cufflinks 10.5358 0.0 37.244   Low
cufflinks 54.4746 0.0 234.379 High High
cufflinks 27.8686 0.0 101.137 High  
cufflinks 15.4714 0.0 53.672    
cufflinks 40.214 0.0 157.285 High  
cufflinks 50.4141 0.0 207.531 High High
cufflinks 25.5866 0.0 92.6413 High  
cufflinks 3.843       High
cufflinks 0.171       Low
cufflinks 1.206        
cufflinks 2.453        
cufflinks 2.356        
cufflinks 0.372       Low
cufflinks 2.199        
cufflinks 1.018        
cufflinks 2.787        
cufflinks 2.966        
cufflinks 2.56        
cufflinks 0.341       Low
cufflinks 2.5        
cufflinks 3.036        
cufflinks 0.172       Low
cufflinks 2.456        
cufflinks 0.549        

0 Strain