Gene : Glyma.03G094700 G. max Wm82.a2.v1
Defline:  (1 of 17) PTHR31194//PTHR31194:SF14 - SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR Genomic Order:  947
Name:  ? Glyma.03G094700 Secondary Identifier:  ? PAC:30519174
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G094700 0.5kb upstream 0.5kb upstream 1678 true Chr03: 27952692-27954369 Glycine max
Glyma.03G094700 0.5kb upstream 0.5kb upstream 500 false Chr03: 27952692-27953191 Glycine max
Glyma.03G094700 0.5kb downstream 0.5kb downstream 1678 true Chr03: 27953192-27954869 Glycine max
Glyma.03G094700 0.5kb downstream 0.5kb downstream 500 false Chr03: 27954370-27954869 Glycine max
Glyma.03G094700 1.0kb upstream 1.0kb upstream 2178 true Chr03: 27952192-27954369 Glycine max
Glyma.03G094700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27952192-27953191 Glycine max
Glyma.03G094700 1.0kb downstream 1.0kb downstream 2178 true Chr03: 27953192-27955369 Glycine max
Glyma.03G094700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27954370-27955369 Glycine max
Glyma.03G094700 2.0kb upstream 2.0kb upstream 3178 true Chr03: 27951192-27954369 Glycine max
Glyma.03G094700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27951192-27953191 Glycine max
Glyma.03G094700 2.0kb downstream 2.0kb downstream 3178 true Chr03: 27953192-27956369 Glycine max
Glyma.03G094700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27954370-27956369 Glycine max
Glyma.03G094700 5.0kb upstream 5.0kb upstream 6178 true Chr03: 27948192-27954369 Glycine max
Glyma.03G094700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27948192-27953191 Glycine max
Glyma.03G094700 5.0kb downstream 5.0kb downstream 6178 true Chr03: 27953192-27959369 Glycine max
Glyma.03G094700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27954370-27959369 Glycine max
Glyma.03G094700 10.0kb upstream 10.0kb upstream 11178 true Chr03: 27943192-27954369 Glycine max
Glyma.03G094700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27943192-27953191 Glycine max
Glyma.03G094700 10.0kb downstream 10.0kb downstream 11178 true Chr03: 27953192-27964369 Glycine max
Glyma.03G094700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27954370-27964369 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312240 5265 Fabidae View MSA
124072043 5270 Rosid View MSA
123744943 5271 Pentapetalae View MSA
122797737 5272 Eudicot View MSA
122048577 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.200259 0.0 0.787017 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0255144 0.0 0.112934 Low Low
cufflinks 0.161395 0.0 0.638899 Low  
cufflinks 0.100469 0.0 0.404858 Low  
cufflinks 0.148743 0.0 0.590735 Low  
cufflinks 0.0352185 0.0 0.151683 Low Low
cufflinks 0.523354 0.0 1.97317   High
cufflinks 0.551509 0.0 2.07528   High
cufflinks 0.245        
cufflinks 0.312       High
cufflinks 0.186        
cufflinks 0.134        
cufflinks 0.305       High
cufflinks 0.093        
cufflinks 0.032     Low Low
cufflinks 0.037     Low Low
cufflinks 0.324       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.063        
cufflinks 0.074     Low  
cufflinks 0.152        
cufflinks 0.146        
cufflinks 0.08     Low  
cufflinks 0.081        

0 Strain