Gene : Glyma.03G162500 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  1625
Name:  ? Glyma.03G162500 Secondary Identifier:  ? PAC:30517184
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G162500 0.5kb upstream 0.5kb upstream 1500 true Chr03: 37721949-37723448 Glycine max
Glyma.03G162500 0.5kb upstream 0.5kb upstream 500 false Chr03: 37721949-37722448 Glycine max
Glyma.03G162500 0.5kb downstream 0.5kb downstream 1500 true Chr03: 37722449-37723948 Glycine max
Glyma.03G162500 0.5kb downstream 0.5kb downstream 500 false Chr03: 37723449-37723948 Glycine max
Glyma.03G162500 1.0kb upstream 1.0kb upstream 2000 true Chr03: 37721449-37723448 Glycine max
Glyma.03G162500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 37721449-37722448 Glycine max
Glyma.03G162500 1.0kb downstream 1.0kb downstream 2000 true Chr03: 37722449-37724448 Glycine max
Glyma.03G162500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 37723449-37724448 Glycine max
Glyma.03G162500 2.0kb upstream 2.0kb upstream 3000 true Chr03: 37720449-37723448 Glycine max
Glyma.03G162500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 37720449-37722448 Glycine max
Glyma.03G162500 2.0kb downstream 2.0kb downstream 3000 true Chr03: 37722449-37725448 Glycine max
Glyma.03G162500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 37723449-37725448 Glycine max
Glyma.03G162500 5.0kb upstream 5.0kb upstream 6000 true Chr03: 37717449-37723448 Glycine max
Glyma.03G162500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 37717449-37722448 Glycine max
Glyma.03G162500 5.0kb downstream 5.0kb downstream 6000 true Chr03: 37722449-37728448 Glycine max
Glyma.03G162500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 37723449-37728448 Glycine max
Glyma.03G162500 10.0kb upstream 10.0kb upstream 11000 true Chr03: 37712449-37723448 Glycine max
Glyma.03G162500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 37712449-37722448 Glycine max
Glyma.03G162500 10.0kb downstream 10.0kb downstream 11000 true Chr03: 37722449-37733448 Glycine max
Glyma.03G162500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 37723449-37733448 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121656185 5273 Angiosperm View MSA
122297752 5265 Fabidae View MSA
124036138 5270 Rosid View MSA
123609531 5271 Pentapetalae View MSA
122644179 5272 Eudicot View MSA
120928270 5274 Embryophyte View MSA
122968883 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.013691 0.0 0.0647754 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0820845 0.0 0.335605 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0219857 0.0 0.0994411 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.967        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094     Low  
cufflinks 0.012     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.881        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.47        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.076     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.518        

0 Strain