Gene : Glyma.03G169000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22874:SF4 - TRANSDUCIN/WD-40 REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  1690
Name:  ? Glyma.03G169000 Secondary Identifier:  ? PAC:30518771
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G169000 0.5kb upstream 0.5kb upstream 8643 true Chr03: 38322301-38330943 Glycine max
Glyma.03G169000 0.5kb upstream 0.5kb upstream 500 false Chr03: 38330444-38330943 Glycine max
Glyma.03G169000 0.5kb downstream 0.5kb downstream 8643 true Chr03: 38321801-38330443 Glycine max
Glyma.03G169000 0.5kb downstream 0.5kb downstream 500 false Chr03: 38321801-38322300 Glycine max
Glyma.03G169000 1.0kb upstream 1.0kb upstream 9143 true Chr03: 38322301-38331443 Glycine max
Glyma.03G169000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38330444-38331443 Glycine max
Glyma.03G169000 1.0kb downstream 1.0kb downstream 9143 true Chr03: 38321301-38330443 Glycine max
Glyma.03G169000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38321301-38322300 Glycine max
Glyma.03G169000 2.0kb upstream 2.0kb upstream 10143 true Chr03: 38322301-38332443 Glycine max
Glyma.03G169000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38330444-38332443 Glycine max
Glyma.03G169000 2.0kb downstream 2.0kb downstream 10143 true Chr03: 38320301-38330443 Glycine max
Glyma.03G169000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38320301-38322300 Glycine max
Glyma.03G169000 5.0kb upstream 5.0kb upstream 13143 true Chr03: 38322301-38335443 Glycine max
Glyma.03G169000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38330444-38335443 Glycine max
Glyma.03G169000 5.0kb downstream 5.0kb downstream 13143 true Chr03: 38317301-38330443 Glycine max
Glyma.03G169000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38317301-38322300 Glycine max
Glyma.03G169000 10.0kb upstream 10.0kb upstream 18143 true Chr03: 38322301-38340443 Glycine max
Glyma.03G169000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38330444-38340443 Glycine max
Glyma.03G169000 10.0kb downstream 10.0kb downstream 18143 true Chr03: 38312301-38330443 Glycine max
Glyma.03G169000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38312301-38322300 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304136 5265 Fabidae View MSA
124072284 5270 Rosid View MSA
123744540 5271 Pentapetalae View MSA
122788668 5272 Eudicot View MSA
122045725 5273 Angiosperm View MSA
121344183 5274 Embryophyte View MSA
123426396 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.2597 0.0 134.647 High  
cufflinks 15.4216 0.0 67.1307   Low
cufflinks 46.0467 0.0 260.541 High High
cufflinks 19.9533 0.0 88.4809 High  
cufflinks 21.2743 0.0 95.2914 High  
cufflinks 25.5888 0.0 120.949 High  
cufflinks 20.8679 0.0 106.572    
cufflinks 19.2351 0.0 85.3911    
cufflinks 17.1271 0.0 68.8834    
cufflinks 1.673        
cufflinks 3.606       High
cufflinks 1.864        
cufflinks 1.781        
cufflinks 1.495        
cufflinks 1.903        
cufflinks 1.67        
cufflinks 3.274       High
cufflinks 1.392       Low
cufflinks 1.359       Low
cufflinks 1.769        
cufflinks 2.584        
cufflinks 1.82        
cufflinks 1.303       Low
cufflinks 3.964       High
cufflinks 1.656        
cufflinks 3.313       High

0 Strain