Gene : Glyma.03G244500 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR19862:SF14 - WD REPEAT-CONTAINING PROTEIN 48 Genomic Order:  2445
Name:  ? Glyma.03G244500 Secondary Identifier:  ? PAC:30518485
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G244500 0.5kb upstream 0.5kb upstream 10362 true Chr03: 44195406-44205767 Glycine max
Glyma.03G244500 0.5kb upstream 0.5kb upstream 500 false Chr03: 44195406-44195905 Glycine max
Glyma.03G244500 0.5kb downstream 0.5kb downstream 10362 true Chr03: 44195906-44206267 Glycine max
Glyma.03G244500 0.5kb downstream 0.5kb downstream 500 false Chr03: 44205768-44206267 Glycine max
Glyma.03G244500 1.0kb upstream 1.0kb upstream 10862 true Chr03: 44194906-44205767 Glycine max
Glyma.03G244500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 44194906-44195905 Glycine max
Glyma.03G244500 1.0kb downstream 1.0kb downstream 10862 true Chr03: 44195906-44206767 Glycine max
Glyma.03G244500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 44205768-44206767 Glycine max
Glyma.03G244500 2.0kb upstream 2.0kb upstream 11862 true Chr03: 44193906-44205767 Glycine max
Glyma.03G244500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 44193906-44195905 Glycine max
Glyma.03G244500 2.0kb downstream 2.0kb downstream 11862 true Chr03: 44195906-44207767 Glycine max
Glyma.03G244500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 44205768-44207767 Glycine max
Glyma.03G244500 5.0kb upstream 5.0kb upstream 14862 true Chr03: 44190906-44205767 Glycine max
Glyma.03G244500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 44190906-44195905 Glycine max
Glyma.03G244500 5.0kb downstream 5.0kb downstream 14862 true Chr03: 44195906-44210767 Glycine max
Glyma.03G244500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 44205768-44210767 Glycine max
Glyma.03G244500 10.0kb upstream 10.0kb upstream 19862 true Chr03: 44185906-44205767 Glycine max
Glyma.03G244500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 44185906-44195905 Glycine max
Glyma.03G244500 10.0kb downstream 10.0kb downstream 19862 true Chr03: 44195906-44215767 Glycine max
Glyma.03G244500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 44205768-44215767 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300641 5265 Fabidae View MSA
124061498 5270 Rosid View MSA
123744300 5271 Pentapetalae View MSA
122788802 5272 Eudicot View MSA
122046725 5273 Angiosperm View MSA
121349721 5274 Embryophyte View MSA
123428825 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.11454 0.0 20.9387    
cufflinks 4.52083 0.0 25.6327    
cufflinks 6.9385 0.0 38.8156   High
cufflinks 4.39876 0.0 23.3026    
cufflinks 4.58813 0.0 25.6806    
cufflinks 3.66555 0.0 12.3396   Low
cufflinks 4.71632 0.0 27.7864    
cufflinks 4.36659 0.0 22.1498    
cufflinks 4.45562 0.0 25.4103    
cufflinks 0.092     Low Low
cufflinks 0.146        
cufflinks 0.169        
cufflinks 0.121        
cufflinks 0.126        
cufflinks 0.231       High
cufflinks 0.13        
cufflinks 0.11       Low
cufflinks 0.165        
cufflinks 0.165        
cufflinks 0.157        
cufflinks 0.147        
cufflinks 0.171        
cufflinks 0.126        
cufflinks 0.152        
cufflinks 0.153        
cufflinks 0.122        

0 Strain