Gene : Glyma.03G221500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12855:SF10 - DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 Genomic Order:  2215
Name:  ? Glyma.03G221500 Secondary Identifier:  ? PAC:30516055
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G221500 0.5kb upstream 0.5kb upstream 7163 true Chr03: 42453175-42460337 Glycine max
Glyma.03G221500 0.5kb upstream 0.5kb upstream 500 false Chr03: 42459838-42460337 Glycine max
Glyma.03G221500 0.5kb downstream 0.5kb downstream 7163 true Chr03: 42452675-42459837 Glycine max
Glyma.03G221500 0.5kb downstream 0.5kb downstream 500 false Chr03: 42452675-42453174 Glycine max
Glyma.03G221500 1.0kb upstream 1.0kb upstream 7663 true Chr03: 42453175-42460837 Glycine max
Glyma.03G221500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 42459838-42460837 Glycine max
Glyma.03G221500 1.0kb downstream 1.0kb downstream 7663 true Chr03: 42452175-42459837 Glycine max
Glyma.03G221500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 42452175-42453174 Glycine max
Glyma.03G221500 2.0kb upstream 2.0kb upstream 8663 true Chr03: 42453175-42461837 Glycine max
Glyma.03G221500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 42459838-42461837 Glycine max
Glyma.03G221500 2.0kb downstream 2.0kb downstream 8663 true Chr03: 42451175-42459837 Glycine max
Glyma.03G221500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 42451175-42453174 Glycine max
Glyma.03G221500 5.0kb upstream 5.0kb upstream 11663 true Chr03: 42453175-42464837 Glycine max
Glyma.03G221500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 42459838-42464837 Glycine max
Glyma.03G221500 5.0kb downstream 5.0kb downstream 11663 true Chr03: 42448175-42459837 Glycine max
Glyma.03G221500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 42448175-42453174 Glycine max
Glyma.03G221500 10.0kb upstream 10.0kb upstream 16663 true Chr03: 42453175-42469837 Glycine max
Glyma.03G221500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 42459838-42469837 Glycine max
Glyma.03G221500 10.0kb downstream 10.0kb downstream 16663 true Chr03: 42443175-42459837 Glycine max
Glyma.03G221500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 42443175-42453174 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301465 5265 Fabidae View MSA
124064017 5270 Rosid View MSA
123739698 5271 Pentapetalae View MSA
122786949 5272 Eudicot View MSA
122041546 5273 Angiosperm View MSA
123429045 5275 Viridiplantae View MSA
121347026 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.98246 0.0 19.6412    
cufflinks 5.26566 0.0 20.6724    
cufflinks 6.70493 0.0 24.7755   High
cufflinks 4.05494 0.0 17.1133   Low
cufflinks 4.4556 0.0 15.7948   Low
cufflinks 5.09794 0.0 23.3605    
cufflinks 5.56442 0.0 24.1746    
cufflinks 5.0652 0.0 22.467    
cufflinks 5.04355 0.0 19.945    
cufflinks 0.254       Low
cufflinks 0.337        
cufflinks 0.377        
cufflinks 0.346        
cufflinks 0.308        
cufflinks 0.35        
cufflinks 0.489        
cufflinks 0.213       Low
cufflinks 0.325        
cufflinks 0.478        
cufflinks 0.461        
cufflinks 0.356        
cufflinks 0.54       High
cufflinks 0.522       High
cufflinks 0.454        
cufflinks 0.509       High
cufflinks 0.32        

0 Strain