Gene : Glyma.03G036800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10126 - TATA-BOX BINDING PROTEIN Genomic Order:  368
Name:  ? Glyma.03G036800 Secondary Identifier:  ? PAC:30516888
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G036800 0.5kb upstream 0.5kb upstream 5616 true Chr03: 4472672-4478287 Glycine max
Glyma.03G036800 0.5kb upstream 0.5kb upstream 500 false Chr03: 4477788-4478287 Glycine max
Glyma.03G036800 0.5kb downstream 0.5kb downstream 5616 true Chr03: 4472172-4477787 Glycine max
Glyma.03G036800 0.5kb downstream 0.5kb downstream 500 false Chr03: 4472172-4472671 Glycine max
Glyma.03G036800 1.0kb upstream 1.0kb upstream 6116 true Chr03: 4472672-4478787 Glycine max
Glyma.03G036800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 4477788-4478787 Glycine max
Glyma.03G036800 1.0kb downstream 1.0kb downstream 6116 true Chr03: 4471672-4477787 Glycine max
Glyma.03G036800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 4471672-4472671 Glycine max
Glyma.03G036800 2.0kb upstream 2.0kb upstream 7116 true Chr03: 4472672-4479787 Glycine max
Glyma.03G036800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 4477788-4479787 Glycine max
Glyma.03G036800 2.0kb downstream 2.0kb downstream 7116 true Chr03: 4470672-4477787 Glycine max
Glyma.03G036800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 4470672-4472671 Glycine max
Glyma.03G036800 5.0kb upstream 5.0kb upstream 10116 true Chr03: 4472672-4482787 Glycine max
Glyma.03G036800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 4477788-4482787 Glycine max
Glyma.03G036800 5.0kb downstream 5.0kb downstream 10116 true Chr03: 4467672-4477787 Glycine max
Glyma.03G036800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 4467672-4472671 Glycine max
Glyma.03G036800 10.0kb upstream 10.0kb upstream 15116 true Chr03: 4472672-4487787 Glycine max
Glyma.03G036800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 4477788-4487787 Glycine max
Glyma.03G036800 10.0kb downstream 10.0kb downstream 15116 true Chr03: 4462672-4477787 Glycine max
Glyma.03G036800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 4462672-4472671 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300671 5265 Fabidae View MSA
124067896 5270 Rosid View MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4158 0.0 69.5863    
cufflinks 17.0039 0.0 60.7992    
cufflinks 23.6957 0.0 83.3388 High High
cufflinks 15.2768 0.0 55.3376    
cufflinks 18.1844 0.0 64.8767    
cufflinks 26.1154 0.0 91.6053 High High
cufflinks 13.1214 0.0 48.7108   Low
cufflinks 19.8011 0.0 70.1834    
cufflinks 19.1048 0.0 67.6158    
cufflinks 2.419        
cufflinks 4.245       High
cufflinks 2.807        
cufflinks 3.096        
cufflinks 2.964        
cufflinks 2.658        
cufflinks 2.509        
cufflinks 4.996       High
cufflinks 2.614        
cufflinks 2.201       Low
cufflinks 2.31        
cufflinks 3.464        
cufflinks 2.406        
cufflinks 2.467        
cufflinks 4.545       High
cufflinks 2.253       Low
cufflinks 3.521        

0 Strain