Gene : Glyma.19G050500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11863:SF33 - LATHOSTEROL OXIDASE Genomic Order:  505
Name:  ? Glyma.19G050500 Secondary Identifier:  ? PAC:30513695
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G050500 0.5kb upstream 0.5kb upstream 5623 true Chr19: 8130209-8135831 Glycine max
Glyma.19G050500 0.5kb upstream 0.5kb upstream 500 false Chr19: 8130209-8130708 Glycine max
Glyma.19G050500 0.5kb downstream 0.5kb downstream 5623 true Chr19: 8130709-8136331 Glycine max
Glyma.19G050500 0.5kb downstream 0.5kb downstream 500 false Chr19: 8135832-8136331 Glycine max
Glyma.19G050500 1.0kb upstream 1.0kb upstream 6123 true Chr19: 8129709-8135831 Glycine max
Glyma.19G050500 1.0kb upstream 1.0kb upstream 1000 false Chr19: 8129709-8130708 Glycine max
Glyma.19G050500 1.0kb downstream 1.0kb downstream 6123 true Chr19: 8130709-8136831 Glycine max
Glyma.19G050500 1.0kb downstream 1.0kb downstream 1000 false Chr19: 8135832-8136831 Glycine max
Glyma.19G050500 2.0kb upstream 2.0kb upstream 7123 true Chr19: 8128709-8135831 Glycine max
Glyma.19G050500 2.0kb upstream 2.0kb upstream 2000 false Chr19: 8128709-8130708 Glycine max
Glyma.19G050500 2.0kb downstream 2.0kb downstream 7123 true Chr19: 8130709-8137831 Glycine max
Glyma.19G050500 2.0kb downstream 2.0kb downstream 2000 false Chr19: 8135832-8137831 Glycine max
Glyma.19G050500 5.0kb upstream 5.0kb upstream 10123 true Chr19: 8125709-8135831 Glycine max
Glyma.19G050500 5.0kb upstream 5.0kb upstream 5000 false Chr19: 8125709-8130708 Glycine max
Glyma.19G050500 5.0kb downstream 5.0kb downstream 10123 true Chr19: 8130709-8140831 Glycine max
Glyma.19G050500 5.0kb downstream 5.0kb downstream 5000 false Chr19: 8135832-8140831 Glycine max
Glyma.19G050500 10.0kb upstream 10.0kb upstream 15123 true Chr19: 8120709-8135831 Glycine max
Glyma.19G050500 10.0kb upstream 10.0kb upstream 10000 false Chr19: 8120709-8130708 Glycine max
Glyma.19G050500 10.0kb downstream 10.0kb downstream 15123 true Chr19: 8130709-8145831 Glycine max
Glyma.19G050500 10.0kb downstream 10.0kb downstream 10000 false Chr19: 8135832-8145831 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307580 5265 Fabidae View MSA
124064501 5270 Rosid View MSA
123737872 5271 Pentapetalae View MSA
122793371 5272 Eudicot View MSA
122046142 5273 Angiosperm View MSA
121347239 5274 Embryophyte View MSA
123426408 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.4994 0.0 50.1587    
cufflinks 25.0637 0.0 67.1076 High  
cufflinks 22.7517 0.0 61.0518 High  
cufflinks 15.064 0.0 41.3585   Low
cufflinks 62.3316 0.0 170.365 High  
cufflinks 62.9388 0.0 171.981 High  
cufflinks 16.3004 0.0 44.4536   Low
cufflinks 44.6882 0.0 119.917 High  
cufflinks 94.2525 0.0 268.012 High High
cufflinks 9.45     High High
cufflinks 4.302        
cufflinks 3.372        
cufflinks 13.236     High High
cufflinks 19.142     High High
cufflinks 5.612     High  
cufflinks 2.116       Low
cufflinks 2.503        
cufflinks 4.132        
cufflinks 4.639        
cufflinks 2.134       Low
cufflinks 5.973     High  
cufflinks 2.272        
cufflinks 3.03        
cufflinks 4.112        
cufflinks 2.149       Low
cufflinks 3.87        

0 Strain