Gene : Glyma.03G028400 G. max Wm82.a2.v1
Defline:  (1 of 17) PF04859 - Plant protein of unknown function (DUF641) (DUF641) Genomic Order:  284
Name:  ? Glyma.03G028400 Secondary Identifier:  ? PAC:30518757
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G028400 0.5kb upstream 0.5kb upstream 3909 true Chr03: 3106878-3110786 Glycine max
Glyma.03G028400 0.5kb upstream 0.5kb upstream 500 false Chr03: 3106878-3107377 Glycine max
Glyma.03G028400 0.5kb downstream 0.5kb downstream 3909 true Chr03: 3107378-3111286 Glycine max
Glyma.03G028400 0.5kb downstream 0.5kb downstream 500 false Chr03: 3110787-3111286 Glycine max
Glyma.03G028400 1.0kb upstream 1.0kb upstream 4409 true Chr03: 3106378-3110786 Glycine max
Glyma.03G028400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 3106378-3107377 Glycine max
Glyma.03G028400 1.0kb downstream 1.0kb downstream 4409 true Chr03: 3107378-3111786 Glycine max
Glyma.03G028400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 3110787-3111786 Glycine max
Glyma.03G028400 2.0kb upstream 2.0kb upstream 5409 true Chr03: 3105378-3110786 Glycine max
Glyma.03G028400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 3105378-3107377 Glycine max
Glyma.03G028400 2.0kb downstream 2.0kb downstream 5409 true Chr03: 3107378-3112786 Glycine max
Glyma.03G028400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 3110787-3112786 Glycine max
Glyma.03G028400 5.0kb upstream 5.0kb upstream 8409 true Chr03: 3102378-3110786 Glycine max
Glyma.03G028400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 3102378-3107377 Glycine max
Glyma.03G028400 5.0kb downstream 5.0kb downstream 8409 true Chr03: 3107378-3115786 Glycine max
Glyma.03G028400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 3110787-3115786 Glycine max
Glyma.03G028400 10.0kb upstream 10.0kb upstream 13409 true Chr03: 3097378-3110786 Glycine max
Glyma.03G028400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 3097378-3107377 Glycine max
Glyma.03G028400 10.0kb downstream 10.0kb downstream 13409 true Chr03: 3107378-3120786 Glycine max
Glyma.03G028400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 3110787-3120786 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041109 5273 Angiosperm View MSA
122307339 5265 Fabidae View MSA
124050308 5270 Rosid View MSA
123737352 5271 Pentapetalae View MSA
122796738 5272 Eudicot View MSA
121351569 5274 Embryophyte View MSA
123382231 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.9207 0.0 57.5489   Low
cufflinks 23.2564 0.0 99.5706 High  
cufflinks 20.6618 0.0 87.7206 High  
cufflinks 23.7593 0.0 100.188 High  
cufflinks 15.6325 0.0 64.993   Low
cufflinks 23.1572 0.0 97.9921 High  
cufflinks 30.4228 0.0 134.858 High High
cufflinks 30.888 0.0 135.224 High High
cufflinks 20.9618 0.0 87.5309 High  
cufflinks 3.152       High
cufflinks 1.994        
cufflinks 2.178        
cufflinks 2.364        
cufflinks 1.881        
cufflinks 1.68       Low
cufflinks 2.215        
cufflinks 2.637       High
cufflinks 2.232        
cufflinks 2.991       High
cufflinks 2.04        
cufflinks 1.83       Low
cufflinks 2.156        
cufflinks 2.521        
cufflinks 1.968        
cufflinks 2.039        
cufflinks 2.051        

0 Strain