Gene : Glyma.03G027200 G. max Wm82.a2.v1
Defline:  (1 of 11) PF00069//PF13855 - Protein kinase domain (Pkinase) // Leucine rich repeat (LRR_8) Genomic Order:  272
Name:  ? Glyma.03G027200 Secondary Identifier:  ? PAC:30517774
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G027200 0.5kb upstream 0.5kb upstream 3853 true Chr03: 2996116-2999968 Glycine max
Glyma.03G027200 0.5kb upstream 0.5kb upstream 500 false Chr03: 2996116-2996615 Glycine max
Glyma.03G027200 0.5kb downstream 0.5kb downstream 3853 true Chr03: 2996616-3000468 Glycine max
Glyma.03G027200 0.5kb downstream 0.5kb downstream 500 false Chr03: 2999969-3000468 Glycine max
Glyma.03G027200 1.0kb upstream 1.0kb upstream 4353 true Chr03: 2995616-2999968 Glycine max
Glyma.03G027200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2995616-2996615 Glycine max
Glyma.03G027200 1.0kb downstream 1.0kb downstream 4353 true Chr03: 2996616-3000968 Glycine max
Glyma.03G027200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2999969-3000968 Glycine max
Glyma.03G027200 2.0kb upstream 2.0kb upstream 5353 true Chr03: 2994616-2999968 Glycine max
Glyma.03G027200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2994616-2996615 Glycine max
Glyma.03G027200 2.0kb downstream 2.0kb downstream 5353 true Chr03: 2996616-3001968 Glycine max
Glyma.03G027200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2999969-3001968 Glycine max
Glyma.03G027200 5.0kb upstream 5.0kb upstream 8353 true Chr03: 2991616-2999968 Glycine max
Glyma.03G027200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2991616-2996615 Glycine max
Glyma.03G027200 5.0kb downstream 5.0kb downstream 8353 true Chr03: 2996616-3004968 Glycine max
Glyma.03G027200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2999969-3004968 Glycine max
Glyma.03G027200 10.0kb upstream 10.0kb upstream 13353 true Chr03: 2986616-2999968 Glycine max
Glyma.03G027200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2986616-2996615 Glycine max
Glyma.03G027200 10.0kb downstream 10.0kb downstream 13353 true Chr03: 2996616-3009968 Glycine max
Glyma.03G027200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2999969-3009968 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312040 5265 Fabidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.80717 0.0 2.82611   High
cufflinks 0.0247894 0.0 0.102797 Low  
cufflinks 0.130424 0.0 0.503228 Low  
cufflinks 0.0326205 0.0 0.133216 Low  
cufflinks 0.0151459 0.0 0.0653987 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00786796 0.0 0.0360369 Low Low
cufflinks 0.0253542 0.0 0.104998 Low  
cufflinks 0.0685321 0.0 0.271496 Low  
cufflinks 0.39       High
cufflinks 0.005     Low Low
cufflinks 0.656       High
cufflinks 0.08     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.09     Low  
cufflinks 0.014     Low  
cufflinks 0.376       High
cufflinks 0.018     Low  
cufflinks 0.079     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.115        
cufflinks 0.141        
cufflinks 0.017     Low  
cufflinks 0.043     Low  
cufflinks 0.019     Low  

0 Strain