Gene : Glyma.03G008500 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR11165//PTHR11165:SF61 - SKP1 Genomic Order:  85
Name:  ? Glyma.03G008500 Secondary Identifier:  ? PAC:30518975
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G008500 0.5kb upstream 0.5kb upstream 7747 true Chr03: 821655-829401 Glycine max
Glyma.03G008500 0.5kb upstream 0.5kb upstream 500 false Chr03: 821655-822154 Glycine max
Glyma.03G008500 0.5kb downstream 0.5kb downstream 7747 true Chr03: 822155-829901 Glycine max
Glyma.03G008500 0.5kb downstream 0.5kb downstream 500 false Chr03: 829402-829901 Glycine max
Glyma.03G008500 1.0kb upstream 1.0kb upstream 8247 true Chr03: 821155-829401 Glycine max
Glyma.03G008500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 821155-822154 Glycine max
Glyma.03G008500 1.0kb downstream 1.0kb downstream 8247 true Chr03: 822155-830401 Glycine max
Glyma.03G008500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 829402-830401 Glycine max
Glyma.03G008500 2.0kb upstream 2.0kb upstream 9247 true Chr03: 820155-829401 Glycine max
Glyma.03G008500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 820155-822154 Glycine max
Glyma.03G008500 2.0kb downstream 2.0kb downstream 9247 true Chr03: 822155-831401 Glycine max
Glyma.03G008500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 829402-831401 Glycine max
Glyma.03G008500 5.0kb upstream 5.0kb upstream 12247 true Chr03: 817155-829401 Glycine max
Glyma.03G008500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 817155-822154 Glycine max
Glyma.03G008500 5.0kb downstream 5.0kb downstream 12247 true Chr03: 822155-834401 Glycine max
Glyma.03G008500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 829402-834401 Glycine max
Glyma.03G008500 10.0kb upstream 10.0kb upstream 17247 true Chr03: 812155-829401 Glycine max
Glyma.03G008500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 812155-822154 Glycine max
Glyma.03G008500 10.0kb downstream 10.0kb downstream 17247 true Chr03: 822155-839401 Glycine max
Glyma.03G008500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 829402-839401 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122312813 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.10202 0.0 27.079    
cufflinks 4.28001 0.0 29.587    
cufflinks 2.8524 0.0 24.6005    
cufflinks 3.12142 0.0 23.2084    
cufflinks 3.76377 0.0 31.5234    
cufflinks 2.17344 0.0 15.709   Low
cufflinks 3.56273 0.0 28.4396    
cufflinks 4.33453 0.0 37.3066    
cufflinks 3.8912 0.0 31.8476    
cufflinks 0.056     Low  
cufflinks 0.018     Low Low
cufflinks 0.062     Low  
cufflinks 0.052     Low  
cufflinks 0.074        
cufflinks 0.024     Low  
cufflinks 0.062     Low  
cufflinks 0.016     Low Low
cufflinks 0.09     Low High
cufflinks 0.087     Low High
cufflinks 0.074     Low  
cufflinks 0.023     Low Low
cufflinks 0.076     Low  
cufflinks 0.085     Low  
cufflinks 0.024     Low  
cufflinks 0.075     Low  
cufflinks 0.017     Low Low

0 Strain