Gene : Glyma.19G011300 G. max Wm82.a2.v1
Defline:  (1 of 135) PF00892 - EamA-like transporter family (EamA) Genomic Order:  113
Name:  ? Glyma.19G011300 Secondary Identifier:  ? PAC:30512402
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G011300 0.5kb upstream 0.5kb upstream 3797 true Chr19: 1093304-1097100 Glycine max
Glyma.19G011300 0.5kb upstream 0.5kb upstream 500 false Chr19: 1093304-1093803 Glycine max
Glyma.19G011300 0.5kb downstream 0.5kb downstream 3797 true Chr19: 1093804-1097600 Glycine max
Glyma.19G011300 0.5kb downstream 0.5kb downstream 500 false Chr19: 1097101-1097600 Glycine max
Glyma.19G011300 1.0kb upstream 1.0kb upstream 4297 true Chr19: 1092804-1097100 Glycine max
Glyma.19G011300 1.0kb upstream 1.0kb upstream 1000 false Chr19: 1092804-1093803 Glycine max
Glyma.19G011300 1.0kb downstream 1.0kb downstream 4297 true Chr19: 1093804-1098100 Glycine max
Glyma.19G011300 1.0kb downstream 1.0kb downstream 1000 false Chr19: 1097101-1098100 Glycine max
Glyma.19G011300 2.0kb upstream 2.0kb upstream 5297 true Chr19: 1091804-1097100 Glycine max
Glyma.19G011300 2.0kb upstream 2.0kb upstream 2000 false Chr19: 1091804-1093803 Glycine max
Glyma.19G011300 2.0kb downstream 2.0kb downstream 5297 true Chr19: 1093804-1099100 Glycine max
Glyma.19G011300 2.0kb downstream 2.0kb downstream 2000 false Chr19: 1097101-1099100 Glycine max
Glyma.19G011300 5.0kb upstream 5.0kb upstream 8297 true Chr19: 1088804-1097100 Glycine max
Glyma.19G011300 5.0kb upstream 5.0kb upstream 5000 false Chr19: 1088804-1093803 Glycine max
Glyma.19G011300 5.0kb downstream 5.0kb downstream 8297 true Chr19: 1093804-1102100 Glycine max
Glyma.19G011300 5.0kb downstream 5.0kb downstream 5000 false Chr19: 1097101-1102100 Glycine max
Glyma.19G011300 10.0kb upstream 10.0kb upstream 13297 true Chr19: 1083804-1097100 Glycine max
Glyma.19G011300 10.0kb upstream 10.0kb upstream 10000 false Chr19: 1083804-1093803 Glycine max
Glyma.19G011300 10.0kb downstream 10.0kb downstream 13297 true Chr19: 1093804-1107100 Glycine max
Glyma.19G011300 10.0kb downstream 10.0kb downstream 10000 false Chr19: 1097101-1107100 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121613731 5273 Angiosperm Singleton cluster - no MSA
122247852 5265 Fabidae Singleton cluster - no MSA
123991540 5270 Rosid Singleton cluster - no MSA
123566484 5271 Pentapetalae Singleton cluster - no MSA
122601242 5272 Eudicot Singleton cluster - no MSA
120885945 5274 Embryophyte Singleton cluster - no MSA
122926720 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.34627 0.0 29.3926    
cufflinks 12.9092 0.0 48.8673   High
cufflinks 1.09259 0.0 8.39992    
cufflinks 0.276819 0.0 2.64245   Low
cufflinks 0.930382 0.0 7.64035    
cufflinks 0.169696 0.0 0.670375 Low Low
cufflinks 0.552877 0.0 2.75637    
cufflinks 10.8096 0.0 42.2602   High
cufflinks 0.687688 0.0 4.49595    
cufflinks 1.513       High
cufflinks 0.002     Low Low
cufflinks 0.162        
cufflinks 0.029     Low  
cufflinks 0.046     Low  
cufflinks 0.006     Low Low
cufflinks 0.562        
cufflinks 0.008     Low Low
cufflinks 0.484        
cufflinks 0.984        
cufflinks 1.258        
cufflinks 0.003     Low Low
cufflinks 1.367        
cufflinks 3.122       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.943        
cufflinks 0.017     Low  

0 Strain