Gene : Glyma.19G009400 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11373 - SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  94
Name:  ? Glyma.19G009400 Secondary Identifier:  ? PAC:30513303
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.19G009400 0.5kb upstream 0.5kb upstream 8709 true Chr19: 884545-893253 Glycine max
Glyma.19G009400 0.5kb upstream 0.5kb upstream 500 false Chr19: 884545-885044 Glycine max
Glyma.19G009400 0.5kb downstream 0.5kb downstream 8709 true Chr19: 885045-893753 Glycine max
Glyma.19G009400 0.5kb downstream 0.5kb downstream 500 false Chr19: 893254-893753 Glycine max
Glyma.19G009400 1.0kb upstream 1.0kb upstream 9209 true Chr19: 884045-893253 Glycine max
Glyma.19G009400 1.0kb upstream 1.0kb upstream 1000 false Chr19: 884045-885044 Glycine max
Glyma.19G009400 1.0kb downstream 1.0kb downstream 9209 true Chr19: 885045-894253 Glycine max
Glyma.19G009400 1.0kb downstream 1.0kb downstream 1000 false Chr19: 893254-894253 Glycine max
Glyma.19G009400 2.0kb upstream 2.0kb upstream 10209 true Chr19: 883045-893253 Glycine max
Glyma.19G009400 2.0kb upstream 2.0kb upstream 2000 false Chr19: 883045-885044 Glycine max
Glyma.19G009400 2.0kb downstream 2.0kb downstream 10209 true Chr19: 885045-895253 Glycine max
Glyma.19G009400 2.0kb downstream 2.0kb downstream 2000 false Chr19: 893254-895253 Glycine max
Glyma.19G009400 5.0kb upstream 5.0kb upstream 13209 true Chr19: 880045-893253 Glycine max
Glyma.19G009400 5.0kb upstream 5.0kb upstream 5000 false Chr19: 880045-885044 Glycine max
Glyma.19G009400 5.0kb downstream 5.0kb downstream 13209 true Chr19: 885045-898253 Glycine max
Glyma.19G009400 5.0kb downstream 5.0kb downstream 5000 false Chr19: 893254-898253 Glycine max
Glyma.19G009400 10.0kb upstream 10.0kb upstream 18209 true Chr19: 875045-893253 Glycine max
Glyma.19G009400 10.0kb upstream 10.0kb upstream 10000 false Chr19: 875045-885044 Glycine max
Glyma.19G009400 10.0kb downstream 10.0kb downstream 18209 true Chr19: 885045-903253 Glycine max
Glyma.19G009400 10.0kb downstream 10.0kb downstream 10000 false Chr19: 893254-903253 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299686 5265 Fabidae View MSA
124060533 5270 Rosid View MSA
123738198 5271 Pentapetalae View MSA
122788126 5272 Eudicot View MSA
122047441 5273 Angiosperm View MSA
121347014 5274 Embryophyte View MSA
123426203 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.96655 0.0 18.1124    
cufflinks 4.17221 0.0 18.674    
cufflinks 9.41949 0.0 41.5031   High
cufflinks 3.70355 0.0 14.2873    
cufflinks 3.19789 0.0 13.0375    
cufflinks 6.33763 0.0 24.405   High
cufflinks 2.8283 0.0 11.9813   Low
cufflinks 3.78088 0.0 17.4364    
cufflinks 3.50691 0.0 10.6675    
cufflinks 0.248        
cufflinks 0.179        
cufflinks 0.456       High
cufflinks 0.281        
cufflinks 0.292        
cufflinks 0.069       Low
cufflinks 0.308        
cufflinks 0.16        
cufflinks 0.316        
cufflinks 0.29        
cufflinks 0.338        
cufflinks 0.14       Low
cufflinks 0.345        
cufflinks 0.345        
cufflinks 0.176        
cufflinks 0.319        
cufflinks 0.146       Low

0 Strain