Gene : Glyma.02G216500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR16295 - TRAF-TYPE ZINC FINGER PROTEIN-RELATED Genomic Order:  2165
Name:  ? Glyma.02G216500 Secondary Identifier:  ? PAC:30509318
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G216500 0.5kb upstream 0.5kb upstream 5847 true Chr02: 40329127-40334973 Glycine max
Glyma.02G216500 0.5kb upstream 0.5kb upstream 500 false Chr02: 40334474-40334973 Glycine max
Glyma.02G216500 0.5kb downstream 0.5kb downstream 5847 true Chr02: 40328627-40334473 Glycine max
Glyma.02G216500 0.5kb downstream 0.5kb downstream 500 false Chr02: 40328627-40329126 Glycine max
Glyma.02G216500 1.0kb upstream 1.0kb upstream 6347 true Chr02: 40329127-40335473 Glycine max
Glyma.02G216500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 40334474-40335473 Glycine max
Glyma.02G216500 1.0kb downstream 1.0kb downstream 6347 true Chr02: 40328127-40334473 Glycine max
Glyma.02G216500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 40328127-40329126 Glycine max
Glyma.02G216500 2.0kb upstream 2.0kb upstream 7347 true Chr02: 40329127-40336473 Glycine max
Glyma.02G216500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 40334474-40336473 Glycine max
Glyma.02G216500 2.0kb downstream 2.0kb downstream 7347 true Chr02: 40327127-40334473 Glycine max
Glyma.02G216500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 40327127-40329126 Glycine max
Glyma.02G216500 5.0kb upstream 5.0kb upstream 10347 true Chr02: 40329127-40339473 Glycine max
Glyma.02G216500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 40334474-40339473 Glycine max
Glyma.02G216500 5.0kb downstream 5.0kb downstream 10347 true Chr02: 40324127-40334473 Glycine max
Glyma.02G216500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 40324127-40329126 Glycine max
Glyma.02G216500 10.0kb upstream 10.0kb upstream 15347 true Chr02: 40329127-40344473 Glycine max
Glyma.02G216500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 40334474-40344473 Glycine max
Glyma.02G216500 10.0kb downstream 10.0kb downstream 15347 true Chr02: 40319127-40334473 Glycine max
Glyma.02G216500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 40319127-40329126 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311612 5265 Fabidae View MSA
124063211 5270 Rosid View MSA
123738829 5271 Pentapetalae View MSA
122787790 5272 Eudicot View MSA
122048290 5273 Angiosperm View MSA
121347686 5274 Embryophyte View MSA
123380601 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.36676 0.0 34.225   Low
cufflinks 6.17939 0.0 35.2046   Low
cufflinks 10.1869 0.0 51.5589   High
cufflinks 6.91464 0.0 32.3534    
cufflinks 6.60426 0.0 30.5279    
cufflinks 9.01474 0.0 37.0388   High
cufflinks 8.67342 0.0 41.0522    
cufflinks 7.54999 0.0 32.8426    
cufflinks 7.75578 0.0 37.6071    
cufflinks 0.583       Low
cufflinks 1.021       High
cufflinks 0.844        
cufflinks 0.802        
cufflinks 0.969       High
cufflinks 0.735        
cufflinks 0.726        
cufflinks 0.576       Low
cufflinks 0.785        
cufflinks 0.829        
cufflinks 0.732        
cufflinks 0.744        
cufflinks 0.693        
cufflinks 0.599       Low
cufflinks 0.995       High
cufflinks 0.607       Low
cufflinks 0.739        

0 Strain