Gene : Glyma.02G305200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13405:SF11 - NUCLEAR PORE COMPLEX PROTEIN NUP133 Genomic Order:  3052
Name:  ? Glyma.02G305200 Secondary Identifier:  ? PAC:30510465
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G305200 0.5kb upstream 0.5kb upstream 7744 true Chr02: 48008420-48016163 Glycine max
Glyma.02G305200 0.5kb upstream 0.5kb upstream 500 false Chr02: 48008420-48008919 Glycine max
Glyma.02G305200 0.5kb downstream 0.5kb downstream 7744 true Chr02: 48008920-48016663 Glycine max
Glyma.02G305200 0.5kb downstream 0.5kb downstream 500 false Chr02: 48016164-48016663 Glycine max
Glyma.02G305200 1.0kb upstream 1.0kb upstream 8244 true Chr02: 48007920-48016163 Glycine max
Glyma.02G305200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48007920-48008919 Glycine max
Glyma.02G305200 1.0kb downstream 1.0kb downstream 8244 true Chr02: 48008920-48017163 Glycine max
Glyma.02G305200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48016164-48017163 Glycine max
Glyma.02G305200 2.0kb upstream 2.0kb upstream 9244 true Chr02: 48006920-48016163 Glycine max
Glyma.02G305200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48006920-48008919 Glycine max
Glyma.02G305200 2.0kb downstream 2.0kb downstream 9244 true Chr02: 48008920-48018163 Glycine max
Glyma.02G305200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48016164-48018163 Glycine max
Glyma.02G305200 5.0kb upstream 5.0kb upstream 12244 true Chr02: 48003920-48016163 Glycine max
Glyma.02G305200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48003920-48008919 Glycine max
Glyma.02G305200 5.0kb downstream 5.0kb downstream 12244 true Chr02: 48008920-48021163 Glycine max
Glyma.02G305200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48016164-48021163 Glycine max
Glyma.02G305200 10.0kb upstream 10.0kb upstream 17244 true Chr02: 47998920-48016163 Glycine max
Glyma.02G305200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47998920-48008919 Glycine max
Glyma.02G305200 10.0kb downstream 10.0kb downstream 17244 true Chr02: 48008920-48026163 Glycine max
Glyma.02G305200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48016164-48026163 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307981 5265 Fabidae View MSA
124065950 5270 Rosid View MSA
123739362 5271 Pentapetalae View MSA
122792648 5272 Eudicot View MSA
122045150 5273 Angiosperm View MSA
121345241 5274 Embryophyte View MSA
123424593 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.82503 0.0 12.9391    
cufflinks 5.04805 0.0 13.5167    
cufflinks 2.58902 0.0 7.19682   Low
cufflinks 4.48029 0.0 12.0416    
cufflinks 4.63456 0.0 12.4498    
cufflinks 2.81123 0.0 7.78068   Low
cufflinks 5.0344 0.0 13.493    
cufflinks 3.50814 0.0 9.54584    
cufflinks 5.458 0.0 14.588   High
cufflinks 1.969        
cufflinks 0.943       Low
cufflinks 3.676        
cufflinks 3.805       High
cufflinks 4.476       High
cufflinks 1.737        
cufflinks 2.625        
cufflinks 1.259       Low
cufflinks 3.146        
cufflinks 5.354       High
cufflinks 1.665        
cufflinks 1.286       Low
cufflinks 2.251        
cufflinks 3.158        
cufflinks 1.59        
cufflinks 1.93        
cufflinks 2.421        

0 Strain