Gene : Glyma.02G281000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10799:SF70 - CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1 Genomic Order:  2810
Name:  ? Glyma.02G281000 Secondary Identifier:  ? PAC:30507894
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G281000 0.5kb upstream 0.5kb upstream 20935 true Chr02: 46322624-46343558 Glycine max
Glyma.02G281000 0.5kb upstream 0.5kb upstream 500 false Chr02: 46343059-46343558 Glycine max
Glyma.02G281000 0.5kb downstream 0.5kb downstream 20935 true Chr02: 46322124-46343058 Glycine max
Glyma.02G281000 0.5kb downstream 0.5kb downstream 500 false Chr02: 46322124-46322623 Glycine max
Glyma.02G281000 1.0kb upstream 1.0kb upstream 21435 true Chr02: 46322624-46344058 Glycine max
Glyma.02G281000 1.0kb upstream 1.0kb upstream 1000 false Chr02: 46343059-46344058 Glycine max
Glyma.02G281000 1.0kb downstream 1.0kb downstream 21435 true Chr02: 46321624-46343058 Glycine max
Glyma.02G281000 1.0kb downstream 1.0kb downstream 1000 false Chr02: 46321624-46322623 Glycine max
Glyma.02G281000 2.0kb upstream 2.0kb upstream 22435 true Chr02: 46322624-46345058 Glycine max
Glyma.02G281000 2.0kb upstream 2.0kb upstream 2000 false Chr02: 46343059-46345058 Glycine max
Glyma.02G281000 2.0kb downstream 2.0kb downstream 22435 true Chr02: 46320624-46343058 Glycine max
Glyma.02G281000 2.0kb downstream 2.0kb downstream 2000 false Chr02: 46320624-46322623 Glycine max
Glyma.02G281000 5.0kb upstream 5.0kb upstream 25435 true Chr02: 46322624-46348058 Glycine max
Glyma.02G281000 5.0kb upstream 5.0kb upstream 5000 false Chr02: 46343059-46348058 Glycine max
Glyma.02G281000 5.0kb downstream 5.0kb downstream 25435 true Chr02: 46317624-46343058 Glycine max
Glyma.02G281000 5.0kb downstream 5.0kb downstream 5000 false Chr02: 46317624-46322623 Glycine max
Glyma.02G281000 10.0kb upstream 10.0kb upstream 30435 true Chr02: 46322624-46353058 Glycine max
Glyma.02G281000 10.0kb upstream 10.0kb upstream 10000 false Chr02: 46343059-46353058 Glycine max
Glyma.02G281000 10.0kb downstream 10.0kb downstream 30435 true Chr02: 46312624-46343058 Glycine max
Glyma.02G281000 10.0kb downstream 10.0kb downstream 10000 false Chr02: 46312624-46322623 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299658 5265 Fabidae View MSA
124061763 5270 Rosid View MSA
123752228 5271 Pentapetalae View MSA
122786822 5272 Eudicot View MSA
122051163 5273 Angiosperm View MSA
121347605 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.03277 0.0 21.6128    
cufflinks 5.17976 0.0 15.4944   Low
cufflinks 10.1672 0.0 41.3745   High
cufflinks 6.22604 0.0 23.7035    
cufflinks 6.10641 0.0 18.4817    
cufflinks 5.28157 0.0 15.8471    
cufflinks 6.82825 0.0 26.609    
cufflinks 5.53658 0.0 20.9781    
cufflinks 7.13474 0.0 27.2357    
cufflinks 1.513       Low
cufflinks 2.687       High
cufflinks 2.261        
cufflinks 1.747        
cufflinks 1.766        
cufflinks 2.692       High
cufflinks 1.868        
cufflinks 1.645       Low
cufflinks 2.219        
cufflinks 1.779        
cufflinks 2.057        
cufflinks 2.096        
cufflinks 2.057        
cufflinks 1.652       Low
cufflinks 2.703       High
cufflinks 1.977        
cufflinks 2.558       High

0 Strain