Gene : Glyma.18G273200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10209//PTHR10209:SF124 - OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN Genomic Order:  2732
Name:  ? Glyma.18G273200 Secondary Identifier:  ? PAC:30555101
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.18G273200 0.5kb upstream 0.5kb upstream 4755 true Chr18: 55594617-55599371 Glycine max
Glyma.18G273200 0.5kb upstream 0.5kb upstream 500 false Chr18: 55598872-55599371 Glycine max
Glyma.18G273200 0.5kb downstream 0.5kb downstream 4755 true Chr18: 55594117-55598871 Glycine max
Glyma.18G273200 0.5kb downstream 0.5kb downstream 500 false Chr18: 55594117-55594616 Glycine max
Glyma.18G273200 1.0kb upstream 1.0kb upstream 5255 true Chr18: 55594617-55599871 Glycine max
Glyma.18G273200 1.0kb upstream 1.0kb upstream 1000 false Chr18: 55598872-55599871 Glycine max
Glyma.18G273200 1.0kb downstream 1.0kb downstream 5255 true Chr18: 55593617-55598871 Glycine max
Glyma.18G273200 1.0kb downstream 1.0kb downstream 1000 false Chr18: 55593617-55594616 Glycine max
Glyma.18G273200 2.0kb upstream 2.0kb upstream 6255 true Chr18: 55594617-55600871 Glycine max
Glyma.18G273200 2.0kb upstream 2.0kb upstream 2000 false Chr18: 55598872-55600871 Glycine max
Glyma.18G273200 2.0kb downstream 2.0kb downstream 6255 true Chr18: 55592617-55598871 Glycine max
Glyma.18G273200 2.0kb downstream 2.0kb downstream 2000 false Chr18: 55592617-55594616 Glycine max
Glyma.18G273200 5.0kb upstream 5.0kb upstream 9255 true Chr18: 55594617-55603871 Glycine max
Glyma.18G273200 5.0kb upstream 5.0kb upstream 5000 false Chr18: 55598872-55603871 Glycine max
Glyma.18G273200 5.0kb downstream 5.0kb downstream 9255 true Chr18: 55589617-55598871 Glycine max
Glyma.18G273200 5.0kb downstream 5.0kb downstream 5000 false Chr18: 55589617-55594616 Glycine max
Glyma.18G273200 10.0kb upstream 10.0kb upstream 14255 true Chr18: 55594617-55608871 Glycine max
Glyma.18G273200 10.0kb upstream 10.0kb upstream 10000 false Chr18: 55598872-55608871 Glycine max
Glyma.18G273200 10.0kb downstream 10.0kb downstream 14255 true Chr18: 55584617-55598871 Glycine max
Glyma.18G273200 10.0kb downstream 10.0kb downstream 10000 false Chr18: 55584617-55594616 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027976 5273 Angiosperm View MSA
122298861 5265 Fabidae View MSA
124036624 5270 Rosid View MSA
123754096 5271 Pentapetalae View MSA
122775509 5272 Eudicot View MSA
121297536 5274 Embryophyte View MSA
123335583 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54615 0.0 8.45503    
cufflinks 1.27146 0.0 4.5209    
cufflinks 10.4151 0.0 28.803    
cufflinks 0.378567 0.0 1.43732   Low
cufflinks 9.3483 0.0 26.1376    
cufflinks 47.5026 0.0 129.718 High High
cufflinks 3.4935 0.0 11.1013    
cufflinks 0.52306 0.0 1.95681   Low
cufflinks 13.7532 0.0 37.2923    
cufflinks 0.254        
cufflinks 52.837     High High
cufflinks 3.107        
cufflinks 5.291        
cufflinks 1.406        
cufflinks 31.001     High High
cufflinks 0.116       Low
cufflinks 1.758        
cufflinks 0.206        
cufflinks 1.496        
cufflinks 0.13       Low
cufflinks 22.382     High High
cufflinks 0.145       Low
cufflinks 0.619        
cufflinks 91.516     High High
cufflinks 0.164       Low
cufflinks 50.676     High High

0 Strain