Gene : Glyma.02G184600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11977:SF46 - VILLIN-2-RELATED Genomic Order:  1846
Name:  ? Glyma.02G184600 Secondary Identifier:  ? PAC:30508067
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G184600 0.5kb upstream 0.5kb upstream 15747 true Chr02: 32239191-32254937 Glycine max
Glyma.02G184600 0.5kb upstream 0.5kb upstream 500 false Chr02: 32239191-32239690 Glycine max
Glyma.02G184600 0.5kb downstream 0.5kb downstream 15747 true Chr02: 32239691-32255437 Glycine max
Glyma.02G184600 0.5kb downstream 0.5kb downstream 500 false Chr02: 32254938-32255437 Glycine max
Glyma.02G184600 1.0kb upstream 1.0kb upstream 16247 true Chr02: 32238691-32254937 Glycine max
Glyma.02G184600 1.0kb upstream 1.0kb upstream 1000 false Chr02: 32238691-32239690 Glycine max
Glyma.02G184600 1.0kb downstream 1.0kb downstream 16247 true Chr02: 32239691-32255937 Glycine max
Glyma.02G184600 1.0kb downstream 1.0kb downstream 1000 false Chr02: 32254938-32255937 Glycine max
Glyma.02G184600 2.0kb upstream 2.0kb upstream 17247 true Chr02: 32237691-32254937 Glycine max
Glyma.02G184600 2.0kb upstream 2.0kb upstream 2000 false Chr02: 32237691-32239690 Glycine max
Glyma.02G184600 2.0kb downstream 2.0kb downstream 17247 true Chr02: 32239691-32256937 Glycine max
Glyma.02G184600 2.0kb downstream 2.0kb downstream 2000 false Chr02: 32254938-32256937 Glycine max
Glyma.02G184600 5.0kb upstream 5.0kb upstream 20247 true Chr02: 32234691-32254937 Glycine max
Glyma.02G184600 5.0kb upstream 5.0kb upstream 5000 false Chr02: 32234691-32239690 Glycine max
Glyma.02G184600 5.0kb downstream 5.0kb downstream 20247 true Chr02: 32239691-32259937 Glycine max
Glyma.02G184600 5.0kb downstream 5.0kb downstream 5000 false Chr02: 32254938-32259937 Glycine max
Glyma.02G184600 10.0kb upstream 10.0kb upstream 25247 true Chr02: 32229691-32254937 Glycine max
Glyma.02G184600 10.0kb upstream 10.0kb upstream 10000 false Chr02: 32229691-32239690 Glycine max
Glyma.02G184600 10.0kb downstream 10.0kb downstream 25247 true Chr02: 32239691-32264937 Glycine max
Glyma.02G184600 10.0kb downstream 10.0kb downstream 10000 false Chr02: 32254938-32264937 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311530 5265 Fabidae View MSA
124073983 5270 Rosid View MSA
123746997 5271 Pentapetalae View MSA
122787653 5272 Eudicot View MSA
122045206 5273 Angiosperm View MSA
121349269 5274 Embryophyte View MSA
123428280 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.0368 0.0 47.4054    
cufflinks 9.26167 0.0 33.14   Low
cufflinks 22.4901 0.0 79.3222 High High
cufflinks 16.7338 0.0 64.2676    
cufflinks 11.5211 0.0 40.713    
cufflinks 19.6777 0.0 66.6349    
cufflinks 15.5798 0.0 49.5132    
cufflinks 17.2735 0.0 56.4721    
cufflinks 13.4339 0.0 49.6543    
cufflinks 2.67        
cufflinks 5.824     High High
cufflinks 3.637        
cufflinks 2.866        
cufflinks 2.413        
cufflinks 6.625     High High
cufflinks 2.176        
cufflinks 1.697       Low
cufflinks 2.856        
cufflinks 1.98        
cufflinks 2.304        
cufflinks 4.197        
cufflinks 2.448        
cufflinks 1.664       Low
cufflinks 5.118       High
cufflinks 2.309        
cufflinks 3.396        

0 Strain