Gene : Glyma.02G159100 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR10742:SF260 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 3 Genomic Order:  1591
Name:  ? Glyma.02G159100 Secondary Identifier:  ? PAC:30507530
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6441 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.02G159100 0.5kb upstream 0.5kb upstream 7331 true Chr02: 17646434-17653764 Glycine max
Glyma.02G159100 0.5kb upstream 0.5kb upstream 500 false Chr02: 17653265-17653764 Glycine max
Glyma.02G159100 0.5kb downstream 0.5kb downstream 7331 true Chr02: 17645934-17653264 Glycine max
Glyma.02G159100 0.5kb downstream 0.5kb downstream 500 false Chr02: 17645934-17646433 Glycine max
Glyma.02G159100 1.0kb upstream 1.0kb upstream 7831 true Chr02: 17646434-17654264 Glycine max
Glyma.02G159100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 17653265-17654264 Glycine max
Glyma.02G159100 1.0kb downstream 1.0kb downstream 7831 true Chr02: 17645434-17653264 Glycine max
Glyma.02G159100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 17645434-17646433 Glycine max
Glyma.02G159100 2.0kb upstream 2.0kb upstream 8831 true Chr02: 17646434-17655264 Glycine max
Glyma.02G159100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 17653265-17655264 Glycine max
Glyma.02G159100 2.0kb downstream 2.0kb downstream 8831 true Chr02: 17644434-17653264 Glycine max
Glyma.02G159100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 17644434-17646433 Glycine max
Glyma.02G159100 5.0kb upstream 5.0kb upstream 11831 true Chr02: 17646434-17658264 Glycine max
Glyma.02G159100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 17653265-17658264 Glycine max
Glyma.02G159100 5.0kb downstream 5.0kb downstream 11831 true Chr02: 17641434-17653264 Glycine max
Glyma.02G159100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 17641434-17646433 Glycine max
Glyma.02G159100 10.0kb upstream 10.0kb upstream 16831 true Chr02: 17646434-17663264 Glycine max
Glyma.02G159100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 17653265-17663264 Glycine max
Glyma.02G159100 10.0kb downstream 10.0kb downstream 16831 true Chr02: 17636434-17653264 Glycine max
Glyma.02G159100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 17636434-17646433 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300122 5265 Fabidae View MSA
124068541 5270 Rosid View MSA
123736657 5271 Pentapetalae View MSA
122791898 5272 Eudicot View MSA
122046966 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.83682 0.0 23.0803   High
cufflinks 3.89714 0.0 16.7361    
cufflinks 6.02643 0.0 27.2529   High
cufflinks 5.00656 0.0 23.7624    
cufflinks 3.74469 0.0 18.547    
cufflinks 2.69572 0.0 12.2989   Low
cufflinks 4.51417 0.0 18.4152    
cufflinks 5.24715 0.0 22.4656    
cufflinks 3.68782 0.0 13.8392    
cufflinks 0.57       Low
cufflinks 0.605        
cufflinks 1.09       High
cufflinks 0.677        
cufflinks 0.704        
cufflinks 0.693        
cufflinks 0.798        
cufflinks 0.595        
cufflinks 1.013       High
cufflinks 1.07       High
cufflinks 0.771        
cufflinks 0.485       Low
cufflinks 0.911        
cufflinks 0.781        
cufflinks 0.676        
cufflinks 0.709        
cufflinks 0.552       Low

0 Strain