Gene : Glyma.01G032400 G. max Wm82.a2.v1
Defline:  (1 of 37) PTHR11017//PTHR11017:SF162 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN Genomic Order:  324
Name:  ? Glyma.01G032400 Secondary Identifier:  ? PAC:30544136
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G032400 0.5kb upstream 0.5kb upstream 7123 true Chr01: 3404331-3411453 Glycine max
Glyma.01G032400 0.5kb upstream 0.5kb upstream 500 false Chr01: 3404331-3404830 Glycine max
Glyma.01G032400 0.5kb downstream 0.5kb downstream 7123 true Chr01: 3404831-3411953 Glycine max
Glyma.01G032400 0.5kb downstream 0.5kb downstream 500 false Chr01: 3411454-3411953 Glycine max
Glyma.01G032400 1.0kb upstream 1.0kb upstream 7623 true Chr01: 3403831-3411453 Glycine max
Glyma.01G032400 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3403831-3404830 Glycine max
Glyma.01G032400 1.0kb downstream 1.0kb downstream 7623 true Chr01: 3404831-3412453 Glycine max
Glyma.01G032400 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3411454-3412453 Glycine max
Glyma.01G032400 2.0kb upstream 2.0kb upstream 8623 true Chr01: 3402831-3411453 Glycine max
Glyma.01G032400 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3402831-3404830 Glycine max
Glyma.01G032400 2.0kb downstream 2.0kb downstream 8623 true Chr01: 3404831-3413453 Glycine max
Glyma.01G032400 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3411454-3413453 Glycine max
Glyma.01G032400 5.0kb upstream 5.0kb upstream 11623 true Chr01: 3399831-3411453 Glycine max
Glyma.01G032400 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3399831-3404830 Glycine max
Glyma.01G032400 5.0kb downstream 5.0kb downstream 11623 true Chr01: 3404831-3416453 Glycine max
Glyma.01G032400 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3411454-3416453 Glycine max
Glyma.01G032400 10.0kb upstream 10.0kb upstream 16623 true Chr01: 3394831-3411453 Glycine max
Glyma.01G032400 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3394831-3404830 Glycine max
Glyma.01G032400 10.0kb downstream 10.0kb downstream 16623 true Chr01: 3404831-3421453 Glycine max
Glyma.01G032400 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3411454-3421453 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297789 5265 Fabidae View MSA
124074947 5270 Rosid View MSA
123753572 5271 Pentapetalae View MSA
122797897 5272 Eudicot View MSA
122051706 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.544569 0.0 2.80221    
cufflinks 0.24859 0.0 1.48008    
cufflinks 0.300089 0.0 1.74078    
cufflinks 0.458127 0.0 2.43563    
cufflinks 0.280942 0.0 1.64734    
cufflinks 3.12173 0.0 9.84067   High
cufflinks 0.00407956 0.0 0.021562 Low Low
cufflinks 0.213651 0.0 1.30785 Low  
cufflinks 0.636042 0.0 3.11856    
cufflinks 0.458       High
cufflinks 0.271        
cufflinks 0.336        
cufflinks 0.453       High
cufflinks 0.246        
cufflinks 0.034     Low Low
cufflinks 0.182        
cufflinks 0.168        
cufflinks 0.324        
cufflinks 0.186        
cufflinks 0.098       Low
cufflinks 0.254        
cufflinks 0.202        
cufflinks 0.347        
cufflinks 0.287        
cufflinks 0.094     Low Low
cufflinks 0.32        

0 Strain